Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC010683.1-201ENST00000473673 378 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 MTND3P7-201ENST00000474435 343 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 RPL7P38-201ENST00000488396 739 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 TRBV12-2-201ENST00000489763 344 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 OR5M7P-201ENST00000526140 972 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC090502.2-201ENST00000549267 280 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC012435.1-202ENST00000568772 240 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 VN1R90P-201ENST00000595717 726 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC110760.3-201ENST00000598794 467 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC010738.1-201ENST00000604970 987 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC112220.3-201ENST00000605502 502 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 OR2AS2P-201ENST00000606902 342 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC009090.3-201ENST00000616553 565 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC092650.2-201ENST00000619984 902 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC098679.5-201ENST00000624394 571 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC120349.2-201ENST00000625002 298 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC092184.1-201ENST00000625042 715 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC058791.1-201ENST00000608412 3198 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 IPO8P1-201ENST00000455509 3109 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 AC027290.2-201ENST00000623210 18662 ntBASIC4.84□□□□□ -1.63
KRT28Q7Z3Y7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
KRT28Q7Z3Y7 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.64
KRT28Q7Z3Y7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
KRT28Q7Z3Y7 AC087190.4-201ENST00000574616 8334 ntBASIC4.84□□□□□ -1.64
KRT28Q7Z3Y7 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
KRT28Q7Z3Y7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 AL391994.1-201ENST00000254724 282 ntBASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 RPL23AP57-201ENST00000332361 466 ntBASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 USP9YP33-201ENST00000412220 421 ntBASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 RPS15AP38-201ENST00000413110 372 ntBASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 RPL36P19-201ENST00000430744 301 ntBASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 USP9YP35-201ENST00000435696 412 ntBASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 RPL12P46-201ENST00000436610 195 ntBASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 MTCO3P16-201ENST00000454456 754 ntBASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 AC092754.2-201ENST00000463506 460 ntBASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 TMED11P-201ENST00000479478 690 ntBASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 RNY4P37-201ENST00000516225 96 ntBASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 AC135279.1-201ENST00000543493 504 ntBASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 LARP7P3-201ENST00000579888 337 ntBASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 AC004987.4-201ENST00000603383 338 ntBASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 AL358072.1-201ENST00000604156 575 ntBASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 AC072039.2-201ENST00000608883 439 ntBASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 AC128687.2-201ENST00000609657 566 ntBASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 AL732618.1-201ENST00000623251 301 ntBASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.83□□□□□ -1.64
KRT28Q7Z3Y7 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 DDX18P3-201ENST00000404856 2007 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 ZNF37BP-203ENST00000452306 1352 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 RNU6-216P-201ENST00000363282 104 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 HMGB3P20-201ENST00000417997 600 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 SDCBPP2-201ENST00000424643 885 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 AC096638.2-201ENST00000434965 711 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 NDUFB1P1-201ENST00000435191 180 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 AP001992.1-205ENST00000462248 379 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 RPS3AP14-201ENST00000483907 780 ntBASIC4.82□□□□□ -1.64
KRT28Q7Z3Y7 KLRA1P-201ENST00000503499 986 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms