Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 snoU109.4-201ENST00000458953 143 ntBASIC3.61□□□□□ -1.83
CASC4Q6P4E1 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CASC4Q6P4E1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.61□□□□□ -1.83
CASC4Q6P4E1 FCF1P3-201ENST00000496394 590 ntBASIC3.61□□□□□ -1.83
CASC4Q6P4E1 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.61□□□□□ -1.83
CASC4Q6P4E1 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.61□□□□□ -1.83
CASC4Q6P4E1 HMGN1P11-201ENST00000508668 303 ntBASIC3.61□□□□□ -1.83
CASC4Q6P4E1 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.61□□□□□ -1.83
CASC4Q6P4E1 RNU6-579P-201ENST00000516879 102 ntBASIC3.61□□□□□ -1.83
CASC4Q6P4E1 RN7SKP289-201ENST00000517244 295 ntBASIC3.61□□□□□ -1.83
CASC4Q6P4E1 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.61□□□□□ -1.83
CASC4Q6P4E1 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.61□□□□□ -1.83
CASC4Q6P4E1 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.61□□□□□ -1.83
CASC4Q6P4E1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.61□□□□□ -1.83
CASC4Q6P4E1 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.61□□□□□ -1.83
CASC4Q6P4E1 HSPE1P3-201ENST00000559254 309 ntBASIC3.61□□□□□ -1.83
CASC4Q6P4E1 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.61□□□□□ -1.83
CASC4Q6P4E1 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.61□□□□□ -1.83
CASC4Q6P4E1 DUXAP3-201ENST00000603616 594 ntBASIC3.61□□□□□ -1.83
CASC4Q6P4E1 AC027449.1-201ENST00000608890 407 ntBASIC3.61□□□□□ -1.83
CASC4Q6P4E1 AC243773.3-201ENST00000613270 256 ntBASIC3.61□□□□□ -1.83
CASC4Q6P4E1 AC069209.1-201ENST00000619282 651 ntBASIC3.61□□□□□ -1.83
CASC4Q6P4E1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.61□□□□□ -1.83
CASC4Q6P4E1 AC068647.1-201ENST00000489539 2265 ntBASIC3.61□□□□□ -1.83
CASC4Q6P4E1 AL161912.2-201ENST00000565707 3007 ntBASIC3.61□□□□□ -1.83
CASC4Q6P4E1 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CASC4Q6P4E1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.61□□□□□ -1.83
CASC4Q6P4E1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CASC4Q6P4E1 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.6□□□□□ -1.83
CASC4Q6P4E1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CASC4Q6P4E1 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
CASC4Q6P4E1 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.6□□□□□ -1.83
CASC4Q6P4E1 SNORD51-201ENST00000384320 80 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 RNU6-1122P-201ENST00000384449 107 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 DHFRP6-201ENST00000401776 268 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 MIR1193-201ENST00000408109 78 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 AC068533.1-201ENST00000418542 415 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.6□□□□□ -1.83
CASC4Q6P4E1 SETP5-201ENST00000437270 562 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 MTCYBP31-201ENST00000438855 1122 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 MTND2P19-201ENST00000449129 1012 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.6□□□□□ -1.83
CASC4Q6P4E1 AC005297.2-201ENST00000450430 606 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 VN1R17P-201ENST00000472048 1090 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 RPL7P38-201ENST00000488396 739 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 AC006390.1-201ENST00000508068 283 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 NPM1P41-201ENST00000512920 831 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 AC026402.1-201ENST00000513642 170 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 RNU6-583P-201ENST00000516012 92 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 RNU6-415P-201ENST00000516252 97 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.6□□□□□ -1.83
CASC4Q6P4E1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.6□□□□□ -1.83
CASC4Q6P4E1 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.6□□□□□ -1.83
CASC4Q6P4E1 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.6□□□□□ -1.83
CASC4Q6P4E1 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.6□□□□□ -1.83
CASC4Q6P4E1 AC012182.1-201ENST00000570133 895 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 MIR3186-201ENST00000577404 85 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 AC093227.2-201ENST00000589357 285 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 AC055876.5-201ENST00000605667 259 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 AC011816.2-201ENST00000607089 556 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 AC090425.2-201ENST00000608818 501 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 AP003355.3-201ENST00000623465 114 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CASC4Q6P4E1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CASC4Q6P4E1 AC004925.1-201ENST00000624256 2706 ntBASIC3.6□□□□□ -1.83
CASC4Q6P4E1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CASC4Q6P4E1 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CASC4Q6P4E1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 Y_RNA.465-201ENST00000384293 102 ntBASIC3.59□□□□□ -1.83
CASC4Q6P4E1 AL445189.1-201ENST00000405722 338 ntBASIC3.59□□□□□ -1.83
CASC4Q6P4E1 AP000567.1-201ENST00000406413 156 ntBASIC3.59□□□□□ -1.83
CASC4Q6P4E1 MTCO3P12-201ENST00000416718 547 ntBASIC3.59□□□□□ -1.83
CASC4Q6P4E1 MTND2P5-201ENST00000432656 1006 ntBASIC3.59□□□□□ -1.83
CASC4Q6P4E1 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 MTCO3P35-201ENST00000485582 781 ntBASIC3.59□□□□□ -1.83
CASC4Q6P4E1 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 HMGB3P15-201ENST00000507326 574 ntBASIC3.59□□□□□ -1.83
CASC4Q6P4E1 AC026784.1-201ENST00000507986 352 ntBASIC3.59□□□□□ -1.83
CASC4Q6P4E1 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.59□□□□□ -1.83
CASC4Q6P4E1 AC024224.1-201ENST00000538284 609 ntBASIC3.59□□□□□ -1.83
CASC4Q6P4E1 DUXAP6-201ENST00000553858 601 ntBASIC3.59□□□□□ -1.83
CASC4Q6P4E1 TGIF1P1-201ENST00000558095 802 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms