Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 MIR4790-201ENST00000577799 79 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 AP005403.1-201ENST00000579720 229 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 MIR3936-201ENST00000584304 110 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 PRPF19P1-201ENST00000584766 898 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 AP000769.2-201ENST00000602344 396 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 AC100812.1-201ENST00000607622 580 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 AC137590.2-201ENST00000619709 240 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF43Q68DV7 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 AC073869.8-201ENST00000641806 335 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF43Q68DV7 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RNF43Q68DV7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF43Q68DV7 CDC27P3-201ENST00000635418 1910 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 AC097504.1-201ENST00000515103 2415 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF43Q68DV7 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.54□□□□□ -1.52
RNF43Q68DV7 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF43Q68DV7 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF43Q68DV7 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
RNF43Q68DV7 AC026951.1-201ENST00000559530 2459 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF43Q68DV7 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF43Q68DV7 RPL23AP57-201ENST00000332361 466 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 Y_RNA.153-201ENST00000363615 91 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 U3.12-201ENST00000364498 214 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 RNU6-99P-201ENST00000364721 107 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 OR1L6-202ENST00000373684 1044 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 PPIAP9-201ENST00000403866 498 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF43Q68DV7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF43Q68DV7 RPL7L1P10-201ENST00000427790 463 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF43Q68DV7 AL049745.1-201ENST00000433953 286 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF43Q68DV7 AC004980.3-201ENST00000447046 365 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF43Q68DV7 AL389915.2-201ENST00000454576 441 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 RPL23AP12-201ENST00000467573 473 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 BX284632.1-201ENST00000478218 541 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 RPL5P22-201ENST00000480199 884 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 AP001025.2-201ENST00000490908 477 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 AC034222.1-201ENST00000494052 532 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 FTH1P9-201ENST00000513251 355 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 RNU6-1143P-201ENST00000516125 104 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 RNU6-566P-201ENST00000516790 107 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF43Q68DV7 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF43Q68DV7 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF43Q68DV7 IMMP1LP2-201ENST00000552954 492 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.53□□□□□ -1.52
RNF43Q68DV7 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF43Q68DV7 AL356432.3-201ENST00000568952 465 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 AC005341.1-201ENST00000571086 708 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 MIR3934-201ENST00000579806 107 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF43Q68DV7 AC069307.1-201ENST00000602820 447 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 BBIP1P1-201ENST00000602999 279 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 FAM25E-202ENST00000608562 189 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 U2.1-201ENST00000618978 145 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 AC241377.1-201ENST00000619797 406 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 AC091953.3-201ENST00000623220 236 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.53□□□□□ -1.52
RNF43Q68DV7 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF43Q68DV7 MTND5P28-201ENST00000438005 1594 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF43Q68DV7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF43Q68DV7 AC114947.2-201ENST00000565748 2125 ntBASIC5.53□□□□□ -1.52
RNF43Q68DV7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF43Q68DV7 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF43Q68DV7 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.53□□□□□ -1.52
RNF43Q68DV7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RNF43Q68DV7 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF43Q68DV7 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF43Q68DV7 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
RNF43Q68DV7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RNF43Q68DV7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.52□□□□□ -1.53
RNF43Q68DV7 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
RNF43Q68DV7 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF43Q68DV7 SNORA67-201ENST00000384423 137 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 SSXP10-201ENST00000402595 565 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 RPL21P67-201ENST00000402896 478 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 DPH3P2-201ENST00000422618 250 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 AL034379.1-201ENST00000423216 253 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 AC233981.1-201ENST00000423224 461 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF43Q68DV7 AC093151.1-201ENST00000427711 313 ntBASIC5.52□□□□□ -1.53
RNF43Q68DV7 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF43Q68DV7 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF43Q68DV7 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF43Q68DV7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms