Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 RNU6-82P-201ENST00000363970 107 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 RNU6-1029P-201ENST00000384109 107 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 Y_RNA.477-201ENST00000384352 108 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 Y_RNA.485-201ENST00000384395 102 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 MIR558-201ENST00000384920 94 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 RNU2-38P-201ENST00000410856 79 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 RPS15AP10-201ENST00000432472 382 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 RPL21P2-201ENST00000440049 481 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 PRELID3BP1-201ENST00000457142 540 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 RN7SL459P-201ENST00000481078 302 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 CR383656.1-201ENST00000484916 377 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 AC093267.1-201ENST00000489176 961 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 RPL23AP72-201ENST00000492447 435 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 OR7H2P-201ENST00000513483 306 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 Y_RNA.708-201ENST00000516950 96 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 AC022616.4-201ENST00000522985 181 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 MGST1-215ENST00000540056 546 ntTSL 3 BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 AL353997.4-201ENST00000586196 166 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 AL031320.1-201ENST00000604177 357 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 MIR7973-1-201ENST00000614683 76 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 AL355365.1-201ENST00000616480 294 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 AC011755.1-201ENST00000623763 2049 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 AC079741.1-201ENST00000321498 212 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 RNU6-984P-201ENST00000363236 109 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 Y_RNA.404-201ENST00000383978 102 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 Y_RNA.424-201ENST00000384063 103 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 RNU6-398P-201ENST00000384143 109 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 RNU6-432P-201ENST00000384196 109 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 EIF4E2P1-201ENST00000393781 255 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 RPL21P1-201ENST00000399532 476 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 AC068533.1-201ENST00000418542 415 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 SNAP23P1-201ENST00000433229 246 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 H3F3BP1-201ENST00000440551 403 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 AC004801.2-202ENST00000463559 283 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 AC008526.1-201ENST00000509149 338 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 Y_RNA.700-201ENST00000516806 100 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 RAB9BP1-201ENST00000519581 626 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 LSM3P2-201ENST00000551246 273 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 MIR4270-201ENST00000581799 70 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 SNORD39.3-201ENST00000584451 71 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 IGHV3-29-201ENST00000604817 344 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 AC009229.3-201ENST00000608056 282 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 uc_338.12-201ENST00000616344 181 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 AC132825.6-201ENST00000638861 357 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 AL359854.1-201ENST00000614203 1594 ntBASIC6.68□□□□□ -1.34
RC3H1Q5TC82 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.68□□□□□ -1.34
RC3H1Q5TC82 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 AC006206.1-201ENST00000544842 3387 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 MAPK10-338ENST00000641647 3362 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 AC011933.2-201ENST00000578539 2790 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 AL442639.1-201ENST00000625030 1899 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 AC020656.2-201ENST00000613291 5309 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 RN7SKP113-201ENST00000363891 295 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 RNA5SP90-201ENST00000364801 99 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 RNA5SP428-201ENST00000365129 132 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 RNU6-187P-201ENST00000384139 106 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 Y_RNA.562-201ENST00000384695 113 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 AC234781.4-201ENST00000419384 244 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC6.67□□□□□ -1.34
RC3H1Q5TC82 KRT8P51-201ENST00000438938 274 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 AL359672.1-201ENST00000442302 409 ntBASIC6.67□□□□□ -1.34
RC3H1Q5TC82 RPL34P20-201ENST00000442771 351 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms