Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC121758.2-201ENST00000553271 193 ntBASIC2.42□□□□□ -2.02
CCDC58Q4VC31 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC58Q4VC31 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC58Q4VC31 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.42□□□□□ -2.02
CCDC58Q4VC31 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC58Q4VC31 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC58Q4VC31 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
CCDC58Q4VC31 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC58Q4VC31 RNU6-618P-201ENST00000363518 112 ntBASIC2.41□□□□□ -2.02
CCDC58Q4VC31 RNA5SP267-201ENST00000364893 126 ntBASIC2.41□□□□□ -2.02
CCDC58Q4VC31 LINC01881-201ENST00000416103 412 ntBASIC2.41□□□□□ -2.02
CCDC58Q4VC31 AC096632.1-201ENST00000427395 310 ntBASIC2.41□□□□□ -2.02
CCDC58Q4VC31 RBM43P1-201ENST00000476891 1081 ntBASIC2.41□□□□□ -2.02
CCDC58Q4VC31 AC126182.1-201ENST00000478134 357 ntBASIC2.41□□□□□ -2.02
CCDC58Q4VC31 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC58Q4VC31 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC58Q4VC31 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC58Q4VC31 AC091826.1-201ENST00000514065 313 ntBASIC2.41□□□□□ -2.02
CCDC58Q4VC31 AC009812.2-201ENST00000517657 457 ntBASIC2.41□□□□□ -2.02
CCDC58Q4VC31 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC58Q4VC31 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.41□□□□□ -2.02
CCDC58Q4VC31 AC008739.2-201ENST00000597006 317 ntBASIC2.41□□□□□ -2.02
CCDC58Q4VC31 U73023.1-201ENST00000603134 700 ntBASIC2.41□□□□□ -2.02
CCDC58Q4VC31 AC006329.2-201ENST00000611491 394 ntBASIC2.41□□□□□ -2.02
CCDC58Q4VC31 NF1P10-201ENST00000613227 742 ntBASIC2.41□□□□□ -2.02
CCDC58Q4VC31 AC034229.5-201ENST00000624258 185 ntBASIC2.41□□□□□ -2.02
CCDC58Q4VC31 AL049737.1-201ENST00000413920 1403 ntBASIC2.41□□□□□ -2.02
CCDC58Q4VC31 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC58Q4VC31 SNORA62.3-201ENST00000365110 153 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC58Q4VC31 AC096533.1-201ENST00000411645 353 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 AC022018.1-201ENST00000430685 241 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC58Q4VC31 AC093156.1-201ENST00000440382 670 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC58Q4VC31 AC011753.1-201ENST00000451001 220 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC58Q4VC31 RPL23AP31-201ENST00000456160 467 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 AC133134.1-201ENST00000466800 359 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 SRIP1-201ENST00000489235 288 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 RN7SL504P-201ENST00000494496 287 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC58Q4VC31 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC58Q4VC31 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC58Q4VC31 RN7SKP57-201ENST00000517248 293 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC58Q4VC31 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC58Q4VC31 AC104115.2-201ENST00000523026 687 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 OR7K1P-201ENST00000546439 926 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC58Q4VC31 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC58Q4VC31 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC58Q4VC31 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC58Q4VC31 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC58Q4VC31 ISCA1P3-201ENST00000577104 373 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC58Q4VC31 AC006539.2-201ENST00000601729 572 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 AC024153.1-201ENST00000603103 365 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 SNORA35B-201ENST00000607417 129 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC58Q4VC31 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 MIR6076-201ENST00000617521 113 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC58Q4VC31 AL645568.2-201ENST00000432815 1337 ntBASIC2.4□□□□□ -2.03
CCDC58Q4VC31 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
CCDC58Q4VC31 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC58Q4VC31 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CCDC58Q4VC31 TAS2R15P-201ENST00000390674 928 ntBASIC2.39□□□□□ -2.03
CCDC58Q4VC31 RNU6-244P-201ENST00000391028 104 ntBASIC2.39□□□□□ -2.03
CCDC58Q4VC31 MIR1250-201ENST00000408098 113 ntBASIC2.39□□□□□ -2.03
CCDC58Q4VC31 MORF4L1P6-201ENST00000418771 268 ntBASIC2.39□□□□□ -2.03
CCDC58Q4VC31 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC58Q4VC31 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC58Q4VC31 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC58Q4VC31 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC58Q4VC31 AC090543.1-201ENST00000492168 485 ntBASIC2.39□□□□□ -2.03
CCDC58Q4VC31 AC004062.1-201ENST00000509926 645 ntBASIC2.39□□□□□ -2.03
CCDC58Q4VC31 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC58Q4VC31 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC58Q4VC31 HIGD1AP18-201ENST00000520730 278 ntBASIC2.39□□□□□ -2.03
CCDC58Q4VC31 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC58Q4VC31 GLUD1P4-201ENST00000590914 418 ntBASIC2.39□□□□□ -2.03
CCDC58Q4VC31 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC58Q4VC31 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
CCDC58Q4VC31 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC58Q4VC31 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC58Q4VC31 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC58Q4VC31 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 RNA5SP72-201ENST00000364442 117 ntBASIC2.38□□□□□ -2.03
CCDC58Q4VC31 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CCDC58Q4VC31 RNU6-1293P-201ENST00000384077 107 ntBASIC2.38□□□□□ -2.03
CCDC58Q4VC31 MIR142-201ENST00000384835 87 ntBASIC2.38□□□□□ -2.03
CCDC58Q4VC31 RNA5SP210-201ENST00000391034 120 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms