Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 OR5P1P-201ENST00000299512 925 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 RNU1-132P-201ENST00000364300 164 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 RNA5SP235-201ENST00000365411 114 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AC007066.1-201ENST00000392902 381 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 MIR1183-201ENST00000408856 89 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 RNU2-71P-201ENST00000411395 189 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AL161631.1-201ENST00000417933 486 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 RBMY1KP-201ENST00000423480 476 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 RPS3AP44-201ENST00000425466 790 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 VDAC1P3-201ENST00000434069 851 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 RPL23AP52-201ENST00000439311 478 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 USP9YP34-201ENST00000453983 808 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 USP9YP10-201ENST00000454868 628 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 SNRPGP9-201ENST00000456025 225 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 BTF3P5-201ENST00000457252 467 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 RPL30P9-201ENST00000465586 330 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 SNRPGP3-201ENST00000469405 227 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 VN1R17P-201ENST00000472048 1090 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 RPS4XP13-201ENST00000483219 789 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AC041039.1-201ENST00000485656 536 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 RPS4XP15-201ENST00000489210 795 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 PARP4P3-201ENST00000510265 317 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 USP9YP5-201ENST00000511770 630 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AL117351.2-201ENST00000513571 157 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 RNU6-1073P-201ENST00000517182 106 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 MRPL49P2-201ENST00000521066 465 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AP002963.1-201ENST00000530590 184 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 TRAV8-5-201ENST00000537369 341 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 MIR5186-201ENST00000577504 120 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AC012360.2-201ENST00000609349 391 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AC064801.1-201ENST00000612025 407 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AC009509.4-201ENST00000619202 509 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AL590240.3-201ENST00000621416 943 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AC018816.2-201ENST00000621460 353 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AC091925.2-201ENST00000625059 256 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 AC008013.2-202ENST00000637965 364 ntBASIC4.83□□□□□ -1.64
LONRF3Q496Y0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.83□□□□□ -1.64
LONRF3Q496Y0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 RNU6-433P-201ENST00000363216 104 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 U3.29-201ENST00000391296 212 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 SNORA11F-201ENST00000408237 128 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AL663109.1-201ENST00000411498 844 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AL160275.2-201ENST00000412010 394 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 UBE2FP3-201ENST00000436366 524 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 RPS24P1-201ENST00000438550 371 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 HMGB1P12-201ENST00000438594 598 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 EPS15P1-201ENST00000448836 336 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 TRGVB-201ENST00000453257 471 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AC079140.3-201ENST00000511111 550 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 AC022861.1-201ENST00000522981 663 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 DEFB131D-201ENST00000526803 184 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 OR6C7P-201ENST00000547875 934 ntBASIC4.82□□□□□ -1.64
LONRF3Q496Y0 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.82□□□□□ -1.64
LONRF3Q496Y0 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 243.3 ms