Protein–RNA interactions for Protein: Q07954

LRP1, Prolow-density lipoprotein receptor-related protein 1, humanhuman

Known RBP Predictions only

Length 4,544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1Q07954 AL158825.1-201ENST00000414735 521 ntBASIC1.34□□□□□ -2.2
LRP1Q07954 AC107081.1-201ENST00000414975 361 ntBASIC1.34□□□□□ -2.2
LRP1Q07954 SNRPGP9-201ENST00000456025 225 ntBASIC1.34□□□□□ -2.2
LRP1Q07954 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.34□□□□□ -2.2
LRP1Q07954 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
LRP1Q07954 RPL31P1-201ENST00000398116 372 ntBASIC1.34□□□□□ -2.2
LRP1Q07954 SPA17P1-201ENST00000416656 452 ntBASIC1.34□□□□□ -2.2
LRP1Q07954 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.34□□□□□ -2.2
LRP1Q07954 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.34□□□□□ -2.2
LRP1Q07954 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC1.34□□□□□ -2.2
LRP1Q07954 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.34□□□□□ -2.2
LRP1Q07954 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.34□□□□□ -2.2
LRP1Q07954 AL022099.1-201ENST00000604551 712 ntBASIC1.34□□□□□ -2.2
LRP1Q07954 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.2
LRP1Q07954 AC002064.3-201ENST00000623448 346 ntBASIC1.34□□□□□ -2.2
LRP1Q07954 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LRP1Q07954 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.33□□□□□ -2.2
LRP1Q07954 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
LRP1Q07954 AC016717.2-201ENST00000609089 5141 ntBASIC1.33□□□□□ -2.2
LRP1Q07954 AL139276.1-201ENST00000311910 1001 ntBASIC1.33□□□□□ -2.2
LRP1Q07954 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.33□□□□□ -2.2
LRP1Q07954 RPS20P25-201ENST00000412447 352 ntBASIC1.33□□□□□ -2.2
LRP1Q07954 AL451074.3-201ENST00000437709 472 ntBASIC1.33□□□□□ -2.2
LRP1Q07954 RPL23AP45-201ENST00000476406 468 ntBASIC1.33□□□□□ -2.2
LRP1Q07954 AC025260.1-201ENST00000548858 430 ntBASIC1.33□□□□□ -2.2
LRP1Q07954 RPL23AP84-201ENST00000571193 464 ntBASIC1.33□□□□□ -2.2
LRP1Q07954 AL451074.6-201ENST00000608512 729 ntBASIC1.33□□□□□ -2.2
LRP1Q07954 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LRP1Q07954 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.33□□□□□ -2.2
LRP1Q07954 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
LRP1Q07954 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LRP1Q07954 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LRP1Q07954 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LRP1Q07954 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
LRP1Q07954 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.33□□□□□ -2.2
LRP1Q07954 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.33□□□□□ -2.2
LRP1Q07954 AC087385.1-201ENST00000475062 312 ntBASIC1.33□□□□□ -2.2
LRP1Q07954 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC1.33□□□□□ -2.2
LRP1Q07954 OR4A45P-201ENST00000529954 901 ntBASIC1.33□□□□□ -2.2
LRP1Q07954 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.33□□□□□ -2.2
LRP1Q07954 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.33□□□□□ -2.2
LRP1Q07954 AC110994.2-201ENST00000635481 492 ntBASIC1.33□□□□□ -2.2
LRP1Q07954 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
LRP1Q07954 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC1.33□□□□□ -2.2
LRP1Q07954 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LRP1Q07954 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.33□□□□□ -2.2
LRP1Q07954 RNA5SP129-201ENST00000410276 118 ntBASIC1.33□□□□□ -2.2
LRP1Q07954 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.33□□□□□ -2.2
LRP1Q07954 MTCO3P21-201ENST00000430791 643 ntBASIC1.33□□□□□ -2.2
LRP1Q07954 AC107398.1-201ENST00000486904 505 ntBASIC1.33□□□□□ -2.2
LRP1Q07954 USP9YP5-201ENST00000511770 630 ntBASIC1.33□□□□□ -2.2
LRP1Q07954 RAC1P5-201ENST00000512182 576 ntBASIC1.33□□□□□ -2.2
LRP1Q07954 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.33□□□□□ -2.2
LRP1Q07954 RN7SKP282-201ENST00000516824 299 ntBASIC1.33□□□□□ -2.2
LRP1Q07954 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.33□□□□□ -2.2
LRP1Q07954 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LRP1Q07954 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC1.33□□□□□ -2.2
LRP1Q07954 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC1.33□□□□□ -2.2
LRP1Q07954 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LRP1Q07954 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
LRP1Q07954 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
LRP1Q07954 OR52B1P-201ENST00000316506 909 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.32□□□□□ -2.2
LRP1Q07954 Y_RNA.112-201ENST00000363250 102 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 RNU6-457P-201ENST00000363999 107 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
LRP1Q07954 RNU6-1140P-201ENST00000410517 106 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 AL118520.1-201ENST00000450770 291 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 TRMT112P2-201ENST00000512910 132 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 HMGB1P41-201ENST00000520234 440 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 AL133271.1-201ENST00000538229 291 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.32□□□□□ -2.2
LRP1Q07954 AC055876.1-202ENST00000567053 138 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 AC016590.3-201ENST00000611171 753 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC1.32□□□□□ -2.2
LRP1Q07954 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC1.32□□□□□ -2.2
LRP1Q07954 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
LRP1Q07954 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
LRP1Q07954 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
LRP1Q07954 MIR9-3-201ENST00000385084 90 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 AL356806.1-201ENST00000422524 916 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 Z82205.1-201ENST00000428456 297 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 FABP5P13-201ENST00000452144 328 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 RAD51AP1P1-201ENST00000484195 1001 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.32□□□□□ -2.2
LRP1Q07954 AC103710.1-201ENST00000610003 901 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 AL109809.4-201ENST00000603520 2185 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 EIF5P1-201ENST00000400019 1231 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 RPS7P9-201ENST00000414704 586 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.32□□□□□ -2.2
LRP1Q07954 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.32□□□□□ -2.2
LRP1Q07954 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC1.32□□□□□ -2.2
LRP1Q07954 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
LRP1Q07954 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC1.32□□□□□ -2.2
LRP1Q07954 AC025881.1-201ENST00000518851 512 ntBASIC1.32□□□□□ -2.2
LRP1Q07954 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.32□□□□□ -2.2
LRP1Q07954 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.32□□□□□ -2.2
LRP1Q07954 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
LRP1Q07954 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LRP1Q07954 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms