Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.07□□□□□ -2.08
TFF3Q07654 RNU6-991P-201ENST00000516168 107 ntBASIC2.07□□□□□ -2.08
TFF3Q07654 SEC11B-201ENST00000518383 499 ntBASIC2.07□□□□□ -2.08
TFF3Q07654 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.07□□□□□ -2.08
TFF3Q07654 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.07□□□□□ -2.08
TFF3Q07654 RANP3-201ENST00000530970 276 ntBASIC2.07□□□□□ -2.08
TFF3Q07654 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.07□□□□□ -2.08
TFF3Q07654 AC025754.2-201ENST00000606491 432 ntBASIC2.07□□□□□ -2.08
TFF3Q07654 AC131902.3-201ENST00000611767 581 ntBASIC2.07□□□□□ -2.08
TFF3Q07654 AL354950.1-201ENST00000614150 568 ntBASIC2.07□□□□□ -2.08
TFF3Q07654 AL136981.2-201ENST00000617319 734 ntBASIC2.07□□□□□ -2.08
TFF3Q07654 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
TFF3Q07654 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.07□□□□□ -2.08
TFF3Q07654 AP006437.1-201ENST00000641440 3685 ntBASIC2.06□□□□□ -2.08
TFF3Q07654 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
TFF3Q07654 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
TFF3Q07654 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
TFF3Q07654 FRG1BP-201ENST00000278882 761 ntBASIC2.06□□□□□ -2.08
TFF3Q07654 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
TFF3Q07654 AL137014.1-201ENST00000420490 1226 ntBASIC2.06□□□□□ -2.08
TFF3Q07654 RPL7P46-201ENST00000425129 740 ntBASIC2.06□□□□□ -2.08
TFF3Q07654 AL603825.1-201ENST00000438481 80 ntBASIC2.06□□□□□ -2.08
TFF3Q07654 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.06□□□□□ -2.08
TFF3Q07654 RPL21P99-201ENST00000480369 423 ntBASIC2.06□□□□□ -2.08
TFF3Q07654 AL024509.2-201ENST00000493462 493 ntBASIC2.06□□□□□ -2.08
TFF3Q07654 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TFF3Q07654 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.06□□□□□ -2.08
TFF3Q07654 RN7SKP282-201ENST00000516824 299 ntBASIC2.06□□□□□ -2.08
TFF3Q07654 AC025881.1-201ENST00000518851 512 ntBASIC2.06□□□□□ -2.08
TFF3Q07654 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.06□□□□□ -2.08
TFF3Q07654 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.06□□□□□ -2.08
TFF3Q07654 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.06□□□□□ -2.08
TFF3Q07654 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.06□□□□□ -2.08
TFF3Q07654 SNRPGP18-201ENST00000553000 214 ntBASIC2.06□□□□□ -2.08
TFF3Q07654 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.06□□□□□ -2.08
TFF3Q07654 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.06□□□□□ -2.08
TFF3Q07654 AC068313.1-201ENST00000604028 1008 ntBASIC2.06□□□□□ -2.08
TFF3Q07654 AL451074.6-201ENST00000608512 729 ntBASIC2.06□□□□□ -2.08
TFF3Q07654 NF1P10-201ENST00000613227 742 ntBASIC2.06□□□□□ -2.08
TFF3Q07654 C2orf27A-204ENST00000623058 969 ntBASIC2.06□□□□□ -2.08
TFF3Q07654 AC026634.1-201ENST00000634369 198 ntBASIC2.06□□□□□ -2.08
TFF3Q07654 AC138649.5-201ENST00000637456 137 ntBASIC2.06□□□□□ -2.08
TFF3Q07654 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.06□□□□□ -2.08
TFF3Q07654 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
TFF3Q07654 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.06□□□□□ -2.08
TFF3Q07654 CUL1P1-201ENST00000509510 2425 ntBASIC2.06□□□□□ -2.08
TFF3Q07654 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
TFF3Q07654 RNU6-482P-201ENST00000391068 107 ntBASIC2.05□□□□□ -2.08
TFF3Q07654 AL162578.1-201ENST00000406202 378 ntBASIC2.05□□□□□ -2.08
TFF3Q07654 AC107081.1-201ENST00000414975 361 ntBASIC2.05□□□□□ -2.08
TFF3Q07654 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.05□□□□□ -2.08
TFF3Q07654 AC073310.1-201ENST00000423226 1033 ntBASIC2.05□□□□□ -2.08
TFF3Q07654 MTCO2P17-201ENST00000424336 677 ntBASIC2.05□□□□□ -2.08
TFF3Q07654 GAPDHP39-201ENST00000481866 979 ntBASIC2.05□□□□□ -2.08
TFF3Q07654 AC087190.1-201ENST00000484462 480 ntBASIC2.05□□□□□ -2.08
TFF3Q07654 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
TFF3Q07654 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.05□□□□□ -2.08
TFF3Q07654 MIR5007-201ENST00000583098 95 ntBASIC2.05□□□□□ -2.08
TFF3Q07654 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.05□□□□□ -2.08
TFF3Q07654 TPMTP1-201ENST00000592307 737 ntBASIC2.05□□□□□ -2.08
TFF3Q07654 AC025811.1-201ENST00000604312 472 ntBASIC2.05□□□□□ -2.08
TFF3Q07654 AC067747.1-201ENST00000608026 250 ntBASIC2.05□□□□□ -2.08
TFF3Q07654 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
TFF3Q07654 AC104454.1-201ENST00000421341 1401 ntBASIC2.05□□□□□ -2.08
TFF3Q07654 ZNF271P-202ENST00000465539 1970 ntBASIC2.05□□□□□ -2.08
TFF3Q07654 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
TFF3Q07654 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
TFF3Q07654 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.05□□□□□ -2.08
TFF3Q07654 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
TFF3Q07654 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
TFF3Q07654 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TFF3Q07654 RNU1-91P-201ENST00000364746 163 ntBASIC2.04□□□□□ -2.08
TFF3Q07654 U8.8-201ENST00000365399 135 ntBASIC2.04□□□□□ -2.08
TFF3Q07654 SNORA41-201ENST00000384675 132 ntBASIC2.04□□□□□ -2.08
TFF3Q07654 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TFF3Q07654 AL158825.1-201ENST00000414735 521 ntBASIC2.04□□□□□ -2.08
TFF3Q07654 MRPS33P4-201ENST00000434892 317 ntBASIC2.04□□□□□ -2.08
TFF3Q07654 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TFF3Q07654 AC104058.1-201ENST00000448028 297 ntBASIC2.04□□□□□ -2.08
TFF3Q07654 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.04□□□□□ -2.08
TFF3Q07654 RPS4XP6-201ENST00000477670 797 ntBASIC2.04□□□□□ -2.08
TFF3Q07654 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.04□□□□□ -2.08
TFF3Q07654 AC008716.1-201ENST00000511084 513 ntBASIC2.04□□□□□ -2.08
TFF3Q07654 RNU6-1334P-201ENST00000516032 105 ntBASIC2.04□□□□□ -2.08
TFF3Q07654 SNORA31.15-201ENST00000516771 132 ntBASIC2.04□□□□□ -2.08
TFF3Q07654 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TFF3Q07654 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.04□□□□□ -2.08
TFF3Q07654 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.04□□□□□ -2.08
TFF3Q07654 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
TFF3Q07654 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
TFF3Q07654 SETP2-201ENST00000553886 926 ntBASIC2.04□□□□□ -2.08
TFF3Q07654 AC104237.2-201ENST00000612456 443 ntBASIC2.04□□□□□ -2.08
TFF3Q07654 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TFF3Q07654 AC092881.1-201ENST00000638218 2733 ntBASIC2.04□□□□□ -2.08
TFF3Q07654 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
TFF3Q07654 AC099063.3-201ENST00000642066 185 ntBASIC2.04□□□□□ -2.08
TFF3Q07654 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
TFF3Q07654 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
TFF3Q07654 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
TFF3Q07654 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms