Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.71□□□□□ -1.82
CDK3Q00526 ISCA1P3-201ENST00000577104 373 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 AC090616.5-202ENST00000582111 297 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.71□□□□□ -1.82
CDK3Q00526 AC025946.2-201ENST00000603398 234 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 AC106791.2-201ENST00000604680 391 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 RNU1-30P-201ENST00000606575 163 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.71□□□□□ -1.82
CDK3Q00526 AC233309.1-201ENST00000619522 751 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 AC112200.1-201ENST00000625015 234 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 CR381572.1-201ENST00000625098 102 ntBASIC3.71□□□□□ -1.82
CDK3Q00526 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.71□□□□□ -1.82
CDK3Q00526 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDK3Q00526 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDK3Q00526 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.71□□□□□ -1.82
CDK3Q00526 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.7□□□□□ -1.82
CDK3Q00526 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
CDK3Q00526 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDK3Q00526 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDK3Q00526 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDK3Q00526 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CDK3Q00526 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.7□□□□□ -1.82
CDK3Q00526 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDK3Q00526 RPL23AP57-201ENST00000332361 466 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 RNA5SP502-201ENST00000362694 119 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 SNORA5A-201ENST00000384111 134 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 MIR23B-201ENST00000384832 97 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 MIR200C-201ENST00000384980 68 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 RNU6-837P-201ENST00000391056 108 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 CYCSP45-201ENST00000402289 315 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 HLFP1-201ENST00000402375 499 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 AL356131.1-201ENST00000405826 414 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 TPMTP2-201ENST00000414372 726 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 MTATP6P27-201ENST00000416987 621 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 AL035423.1-201ENST00000420331 213 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CDK3Q00526 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.7□□□□□ -1.82
CDK3Q00526 AL593851.1-201ENST00000426171 157 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.7□□□□□ -1.82
CDK3Q00526 AL590233.1-201ENST00000430017 456 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 FTH1P6-201ENST00000430768 320 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 MRPS18BP2-201ENST00000434310 759 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.7□□□□□ -1.82
CDK3Q00526 HMGN2P21-201ENST00000447764 270 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.7□□□□□ -1.82
CDK3Q00526 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.7□□□□□ -1.82
CDK3Q00526 RPS20P32-201ENST00000456044 356 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 SUMO2P2-201ENST00000456482 255 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 BTF3P5-201ENST00000457252 467 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 AC091564.1-201ENST00000464563 479 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.7□□□□□ -1.82
CDK3Q00526 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.7□□□□□ -1.82
CDK3Q00526 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
CDK3Q00526 AC010625.1-201ENST00000511296 403 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 GTF2IP22-201ENST00000554443 182 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.7□□□□□ -1.82
CDK3Q00526 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.7□□□□□ -1.82
CDK3Q00526 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.7□□□□□ -1.82
CDK3Q00526 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.7□□□□□ -1.82
CDK3Q00526 VN1R90P-201ENST00000595717 726 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 AC244505.7-201ENST00000599675 272 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 CLIC4P2-201ENST00000601934 717 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 AC018638.7-201ENST00000605836 1114 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 AC091925.2-201ENST00000625059 256 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 OR8B1P-202ENST00000641132 1178 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 DDX43P2-201ENST00000604753 1354 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.7□□□□□ -1.82
CDK3Q00526 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CDK3Q00526 AC090337.1-201ENST00000579651 2074 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 MAPK10-372ENST00000641954 3413 ntBASIC3.7□□□□□ -1.82
CDK3Q00526 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.7□□□□□ -1.82
CDK3Q00526 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDK3Q00526 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CDK3Q00526 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.69□□□□□ -1.82
CDK3Q00526 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDK3Q00526 SNORA73.2-201ENST00000364946 201 ntBASIC3.69□□□□□ -1.82
CDK3Q00526 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CDK3Q00526 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CDK3Q00526 RNA5SP424-201ENST00000390988 115 ntBASIC3.69□□□□□ -1.82
CDK3Q00526 RNU6-952P-201ENST00000391164 108 ntBASIC3.69□□□□□ -1.82
CDK3Q00526 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.69□□□□□ -1.82
CDK3Q00526 RPL7P60-201ENST00000397636 735 ntBASIC3.69□□□□□ -1.82
CDK3Q00526 AL049545.1-201ENST00000401856 572 ntBASIC3.69□□□□□ -1.82
CDK3Q00526 RNA5SP39-201ENST00000411245 120 ntBASIC3.69□□□□□ -1.82
CDK3Q00526 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.69□□□□□ -1.82
CDK3Q00526 AC244098.2-201ENST00000422068 99 ntBASIC3.69□□□□□ -1.82
CDK3Q00526 AL391219.1-201ENST00000422570 483 ntBASIC3.69□□□□□ -1.82
CDK3Q00526 AL513174.1-201ENST00000423182 629 ntBASIC3.69□□□□□ -1.82
CDK3Q00526 AC093698.1-201ENST00000423843 571 ntBASIC3.69□□□□□ -1.82
CDK3Q00526 AL035407.1-201ENST00000429211 571 ntBASIC3.69□□□□□ -1.82
CDK3Q00526 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDK3Q00526 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.69□□□□□ -1.82
CDK3Q00526 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.69□□□□□ -1.82
CDK3Q00526 AC006480.1-201ENST00000449887 378 ntBASIC3.69□□□□□ -1.82
CDK3Q00526 ART2BP-201ENST00000453501 499 ntBASIC3.69□□□□□ -1.82
CDK3Q00526 AC098824.1-201ENST00000453565 980 ntBASIC3.69□□□□□ -1.82
CDK3Q00526 HMGB3P30-201ENST00000457863 606 ntBASIC3.69□□□□□ -1.82
CDK3Q00526 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDK3Q00526 PRELID3BP7-201ENST00000503606 469 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms