Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.14□□□□□ -2.07
ABCA4P78363 RN7SL499P-201ENST00000481141 276 ntBASIC2.14□□□□□ -2.07
ABCA4P78363 AC108471.1-201ENST00000513977 287 ntBASIC2.14□□□□□ -2.07
ABCA4P78363 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.14□□□□□ -2.07
ABCA4P78363 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.14□□□□□ -2.07
ABCA4P78363 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.14□□□□□ -2.07
ABCA4P78363 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.14□□□□□ -2.07
ABCA4P78363 AADACP1-206ENST00000561502 1193 ntBASIC2.14□□□□□ -2.07
ABCA4P78363 VN1R81P-201ENST00000602085 372 ntBASIC2.14□□□□□ -2.07
ABCA4P78363 AC012119.1-201ENST00000603184 222 ntBASIC2.14□□□□□ -2.07
ABCA4P78363 AL020991.1-201ENST00000612314 373 ntBASIC2.14□□□□□ -2.07
ABCA4P78363 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.14□□□□□ -2.07
ABCA4P78363 FRG1DP-201ENST00000635586 771 ntBASIC2.14□□□□□ -2.07
ABCA4P78363 RAD1P1-201ENST00000231383 813 ntBASIC2.13□□□□□ -2.07
ABCA4P78363 RPL9P7-201ENST00000330965 580 ntBASIC2.13□□□□□ -2.07
ABCA4P78363 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
ABCA4P78363 RNU2-37P-201ENST00000410695 177 ntBASIC2.13□□□□□ -2.07
ABCA4P78363 AL451074.5-201ENST00000415894 435 ntBASIC2.13□□□□□ -2.07
ABCA4P78363 HMGN2P23-201ENST00000456759 269 ntBASIC2.13□□□□□ -2.07
ABCA4P78363 RPL23AP42-201ENST00000471152 471 ntBASIC2.13□□□□□ -2.07
ABCA4P78363 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.13□□□□□ -2.07
ABCA4P78363 AC118282.1-201ENST00000506408 765 ntBASIC2.13□□□□□ -2.07
ABCA4P78363 AC092436.1-201ENST00000506450 503 ntBASIC2.13□□□□□ -2.07
ABCA4P78363 MTND4P2-201ENST00000507767 1203 ntBASIC2.13□□□□□ -2.07
ABCA4P78363 AC119751.1-201ENST00000513357 765 ntBASIC2.13□□□□□ -2.07
ABCA4P78363 AC010265.1-201ENST00000513509 211 ntBASIC2.13□□□□□ -2.07
ABCA4P78363 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.13□□□□□ -2.07
ABCA4P78363 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.13□□□□□ -2.07
ABCA4P78363 AC006270.2-201ENST00000578523 652 ntBASIC2.13□□□□□ -2.07
ABCA4P78363 AC010200.2-201ENST00000605098 235 ntBASIC2.13□□□□□ -2.07
ABCA4P78363 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.13□□□□□ -2.07
ABCA4P78363 SAGE4P-201ENST00000442271 3381 ntBASIC2.13□□□□□ -2.07
ABCA4P78363 ZNF72P-201ENST00000425869 1908 ntBASIC2.13□□□□□ -2.07
ABCA4P78363 AF127577.6-201ENST00000623352 2191 ntBASIC2.13□□□□□ -2.07
ABCA4P78363 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ABCA4P78363 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
ABCA4P78363 USP8P1-201ENST00000494673 3183 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 SNORD114-1-201ENST00000362705 72 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 SNORA70E-201ENST00000384492 135 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ABCA4P78363 AL031736.2-201ENST00000426573 787 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.12□□□□□ -2.07
ABCA4P78363 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.12□□□□□ -2.07
ABCA4P78363 RPL7P52-201ENST00000449200 742 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 AC132942.1-201ENST00000486753 483 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 MTATP6P22-201ENST00000507369 598 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.12□□□□□ -2.07
ABCA4P78363 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.12□□□□□ -2.07
ABCA4P78363 AC008716.1-201ENST00000511084 513 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.12□□□□□ -2.07
ABCA4P78363 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.12□□□□□ -2.07
ABCA4P78363 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.12□□□□□ -2.07
ABCA4P78363 AP001004.1-201ENST00000582468 324 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.12□□□□□ -2.07
ABCA4P78363 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.12□□□□□ -2.07
ABCA4P78363 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.12□□□□□ -2.07
ABCA4P78363 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.12□□□□□ -2.07
ABCA4P78363 AC022079.2-201ENST00000619739 566 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.12□□□□□ -2.07
ABCA4P78363 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
ABCA4P78363 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
ABCA4P78363 CCNB2P1-201ENST00000399411 1150 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 AC007064.1-201ENST00000412238 351 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.12□□□□□ -2.07
ABCA4P78363 Z98742.3-201ENST00000418637 326 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 BTG3P1-201ENST00000435859 716 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 AC011816.1-201ENST00000441346 546 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.12□□□□□ -2.07
ABCA4P78363 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.12□□□□□ -2.07
ABCA4P78363 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.12□□□□□ -2.07
ABCA4P78363 TRAV31-201ENST00000502780 342 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.12□□□□□ -2.07
ABCA4P78363 RN7SKP24-201ENST00000515888 284 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 AC022790.1-201ENST00000522872 204 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 MIR6873-201ENST00000622788 63 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 CRYM-AS1-204ENST00000637983 556 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 AL356489.2-201ENST00000566968 3528 ntBASIC2.12□□□□□ -2.07
ABCA4P78363 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
ABCA4P78363 AC069528.2-201ENST00000624849 1991 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 Y_RNA.140-201ENST00000363474 103 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.11□□□□□ -2.07
ABCA4P78363 CEACAMP4-201ENST00000457676 421 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.11□□□□□ -2.07
ABCA4P78363 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ABCA4P78363 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
ABCA4P78363 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.11□□□□□ -2.07
ABCA4P78363 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ABCA4P78363 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ABCA4P78363 AC006020.1-201ENST00000420179 1854 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
ABCA4P78363 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.11□□□□□ -2.07
ABCA4P78363 AC092435.3-201ENST00000565538 3654 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ABCA4P78363 Y_RNA.4-201ENST00000362333 112 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 RNU6-356P-201ENST00000384140 107 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 SNORA41-201ENST00000384675 132 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 AL512633.1-201ENST00000399931 655 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 RN7SKP32-201ENST00000410167 303 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 VTA1P1-201ENST00000414044 866 ntBASIC2.11□□□□□ -2.07
ABCA4P78363 ELOCP6-201ENST00000429066 328 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms