Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 RNA5SP310-201ENST00000459084 116 ntBASIC2.59□□□□□ -1.99
LSM6P62312 RPL7P49-201ENST00000471402 708 ntBASIC2.59□□□□□ -1.99
LSM6P62312 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LSM6P62312 AP004217.1-201ENST00000480579 346 ntBASIC2.59□□□□□ -1.99
LSM6P62312 RPL30P14-201ENST00000482744 348 ntBASIC2.59□□□□□ -1.99
LSM6P62312 AC098799.2-201ENST00000509466 868 ntBASIC2.59□□□□□ -1.99
LSM6P62312 AC008885.2-201ENST00000509506 930 ntBASIC2.59□□□□□ -1.99
LSM6P62312 FAM60DP-201ENST00000524174 632 ntBASIC2.59□□□□□ -1.99
LSM6P62312 OR5G4P-201ENST00000525251 760 ntBASIC2.59□□□□□ -1.99
LSM6P62312 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.59□□□□□ -1.99
LSM6P62312 AC139103.1-201ENST00000534696 1030 ntBASIC2.59□□□□□ -1.99
LSM6P62312 H3F3AP1-201ENST00000559984 334 ntBASIC2.59□□□□□ -1.99
LSM6P62312 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.59□□□□□ -1.99
LSM6P62312 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.59□□□□□ -1.99
LSM6P62312 AC006539.2-201ENST00000601729 572 ntBASIC2.59□□□□□ -1.99
LSM6P62312 BNIP3P11-201ENST00000603878 563 ntBASIC2.59□□□□□ -1.99
LSM6P62312 AC128687.1-201ENST00000605304 619 ntBASIC2.59□□□□□ -1.99
LSM6P62312 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.59□□□□□ -1.99
LSM6P62312 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.59□□□□□ -1.99
LSM6P62312 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.59□□□□□ -2
LSM6P62312 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
LSM6P62312 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -2
LSM6P62312 AC096644.4-201ENST00000563417 2912 ntBASIC2.58□□□□□ -2
LSM6P62312 AC046144.1-201ENST00000478559 1853 ntBASIC2.58□□□□□ -2
LSM6P62312 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
LSM6P62312 RNU6-263P-201ENST00000363811 107 ntBASIC2.58□□□□□ -2
LSM6P62312 SNORA1.3-201ENST00000384676 136 ntBASIC2.58□□□□□ -2
LSM6P62312 MIR23B-201ENST00000384832 97 ntBASIC2.58□□□□□ -2
LSM6P62312 MIR142-201ENST00000384835 87 ntBASIC2.58□□□□□ -2
LSM6P62312 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.58□□□□□ -2
LSM6P62312 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.58□□□□□ -2
LSM6P62312 RPL19P1-201ENST00000411635 428 ntBASIC2.58□□□□□ -2
LSM6P62312 RPL7P8-201ENST00000411964 730 ntBASIC2.58□□□□□ -2
LSM6P62312 RAP1BP1-201ENST00000412709 553 ntBASIC2.58□□□□□ -2
LSM6P62312 DUTP6-201ENST00000425573 462 ntBASIC2.58□□□□□ -2
LSM6P62312 AL445528.1-201ENST00000426330 420 ntBASIC2.58□□□□□ -2
LSM6P62312 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.58□□□□□ -2
LSM6P62312 AC006548.1-201ENST00000427470 102 ntBASIC2.58□□□□□ -2
LSM6P62312 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
LSM6P62312 UBBP3-201ENST00000445497 241 ntBASIC2.58□□□□□ -2
LSM6P62312 AL590664.1-201ENST00000448065 339 ntBASIC2.58□□□□□ -2
LSM6P62312 AL162389.1-201ENST00000449233 177 ntBASIC2.58□□□□□ -2
LSM6P62312 GSTA11P-201ENST00000452866 669 ntBASIC2.58□□□□□ -2
LSM6P62312 BLNK-209ENST00000495266 440 ntTSL 5 BASIC2.58□□□□□ -2
LSM6P62312 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.58□□□□□ -2
LSM6P62312 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.58□□□□□ -2
LSM6P62312 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.58□□□□□ -2
LSM6P62312 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.58□□□□□ -2
LSM6P62312 AC087373.1-201ENST00000524920 491 ntBASIC2.58□□□□□ -2
LSM6P62312 AC125611.2-201ENST00000551907 647 ntBASIC2.58□□□□□ -2
LSM6P62312 NBEAP1-201ENST00000554452 979 ntBASIC2.58□□□□□ -2
LSM6P62312 MTCO3P13-201ENST00000577757 781 ntBASIC2.58□□□□□ -2
LSM6P62312 MTCO3P22-201ENST00000603219 784 ntBASIC2.58□□□□□ -2
LSM6P62312 AL133507.1-201ENST00000605269 557 ntBASIC2.58□□□□□ -2
LSM6P62312 AL159169.3-201ENST00000608871 561 ntBASIC2.58□□□□□ -2
LSM6P62312 AC090115.4-201ENST00000609970 188 ntBASIC2.58□□□□□ -2
LSM6P62312 AL355810.1-201ENST00000614629 552 ntBASIC2.58□□□□□ -2
LSM6P62312 CYCSP41-201ENST00000616920 296 ntBASIC2.58□□□□□ -2
LSM6P62312 CR381572.1-201ENST00000625098 102 ntBASIC2.58□□□□□ -2
LSM6P62312 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.58□□□□□ -2
LSM6P62312 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.58□□□□□ -2
LSM6P62312 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.58□□□□□ -2
LSM6P62312 AC119674.1-220ENST00000641502 1048 ntBASIC2.58□□□□□ -2
LSM6P62312 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
LSM6P62312 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.58□□□□□ -2
LSM6P62312 MTND4P8-201ENST00000514997 1362 ntBASIC2.58□□□□□ -2
LSM6P62312 AC006378.2-201ENST00000623178 2476 ntBASIC2.58□□□□□ -2
LSM6P62312 AC000403.1-201ENST00000613696 3585 ntBASIC2.57□□□□□ -2
LSM6P62312 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.57□□□□□ -2
LSM6P62312 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LSM6P62312 RNU1-35P-201ENST00000362782 153 ntBASIC2.57□□□□□ -2
LSM6P62312 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
LSM6P62312 MIR7-1-201ENST00000384871 110 ntBASIC2.57□□□□□ -2
LSM6P62312 MIR181B1-201ENST00000385240 110 ntBASIC2.57□□□□□ -2
LSM6P62312 AL451074.5-201ENST00000415894 435 ntBASIC2.57□□□□□ -2
LSM6P62312 HMGN2P30-201ENST00000423237 256 ntBASIC2.57□□□□□ -2
LSM6P62312 AL512649.1-201ENST00000428997 581 ntBASIC2.57□□□□□ -2
LSM6P62312 AC097499.1-201ENST00000444277 208 ntBASIC2.57□□□□□ -2
LSM6P62312 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.57□□□□□ -2
LSM6P62312 AC233982.1-201ENST00000451247 436 ntBASIC2.57□□□□□ -2
LSM6P62312 RPL21P41-201ENST00000459863 264 ntBASIC2.57□□□□□ -2
LSM6P62312 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.57□□□□□ -2
LSM6P62312 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.57□□□□□ -2
LSM6P62312 SNORA31.8-201ENST00000516327 108 ntBASIC2.57□□□□□ -2
LSM6P62312 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.57□□□□□ -2
LSM6P62312 AP001804.3-201ENST00000525146 880 ntBASIC2.57□□□□□ -2
LSM6P62312 OR10V3P-201ENST00000525712 725 ntBASIC2.57□□□□□ -2
LSM6P62312 C1DP5-201ENST00000525775 383 ntBASIC2.57□□□□□ -2
LSM6P62312 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.57□□□□□ -2
LSM6P62312 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.57□□□□□ -2
LSM6P62312 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.57□□□□□ -2
LSM6P62312 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
LSM6P62312 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.57□□□□□ -2
LSM6P62312 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.57□□□□□ -2
LSM6P62312 NUTF2P8-201ENST00000604593 363 ntBASIC2.57□□□□□ -2
LSM6P62312 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
LSM6P62312 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LSM6P62312 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.57□□□□□ -2
LSM6P62312 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LSM6P62312 AC108206.1-201ENST00000570186 4159 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms