Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.63□□□□□ -1.99
ACTBP60709 AC092470.1-201ENST00000546187 132 ntBASIC2.63□□□□□ -1.99
ACTBP60709 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.63□□□□□ -1.99
ACTBP60709 AP005205.1-201ENST00000563503 508 ntBASIC2.63□□□□□ -1.99
ACTBP60709 MTCO3P13-201ENST00000577757 781 ntBASIC2.63□□□□□ -1.99
ACTBP60709 AC006504.3-201ENST00000586818 523 ntBASIC2.63□□□□□ -1.99
ACTBP60709 AC083760.1-201ENST00000589621 670 ntBASIC2.63□□□□□ -1.99
ACTBP60709 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.63□□□□□ -1.99
ACTBP60709 AL162574.2-201ENST00000614618 657 ntBASIC2.63□□□□□ -1.99
ACTBP60709 AC004777.1-201ENST00000624317 287 ntBASIC2.63□□□□□ -1.99
ACTBP60709 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.63□□□□□ -1.99
ACTBP60709 AC068620.4-201ENST00000636730 1182 ntBASIC2.63□□□□□ -1.99
ACTBP60709 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ACTBP60709 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ACTBP60709 AC011460.1-201ENST00000636268 1834 ntBASIC2.63□□□□□ -1.99
ACTBP60709 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
ACTBP60709 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ACTBP60709 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.63□□□□□ -1.99
ACTBP60709 AL049781.1-201ENST00000623195 3585 ntBASIC2.62□□□□□ -1.99
ACTBP60709 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.62□□□□□ -1.99
ACTBP60709 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.62□□□□□ -1.99
ACTBP60709 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.62□□□□□ -1.99
ACTBP60709 SNORA63.1-201ENST00000362493 131 ntBASIC2.62□□□□□ -1.99
ACTBP60709 MIR142-201ENST00000384835 87 ntBASIC2.62□□□□□ -1.99
ACTBP60709 MIR183-201ENST00000384958 110 ntBASIC2.62□□□□□ -1.99
ACTBP60709 HMGN1P24-201ENST00000412282 298 ntBASIC2.62□□□□□ -1.99
ACTBP60709 RPS3AP9-201ENST00000417027 792 ntBASIC2.62□□□□□ -1.99
ACTBP60709 AL137014.1-201ENST00000420490 1226 ntBASIC2.62□□□□□ -1.99
ACTBP60709 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.62□□□□□ -1.99
ACTBP60709 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.62□□□□□ -1.99
ACTBP60709 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.62□□□□□ -1.99
ACTBP60709 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.62□□□□□ -1.99
ACTBP60709 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.62□□□□□ -1.99
ACTBP60709 AC008155.2-201ENST00000464337 397 ntBASIC2.62□□□□□ -1.99
ACTBP60709 RPS17P11-201ENST00000474297 293 ntBASIC2.62□□□□□ -1.99
ACTBP60709 RPS4XP6-201ENST00000477670 797 ntBASIC2.62□□□□□ -1.99
ACTBP60709 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.62□□□□□ -1.99
ACTBP60709 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.62□□□□□ -1.99
ACTBP60709 AC021678.1-201ENST00000505195 936 ntBASIC2.62□□□□□ -1.99
ACTBP60709 AC104057.1-201ENST00000515547 497 ntBASIC2.62□□□□□ -1.99
ACTBP60709 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.62□□□□□ -1.99
ACTBP60709 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.62□□□□□ -1.99
ACTBP60709 C1DP5-201ENST00000525775 383 ntBASIC2.62□□□□□ -1.99
ACTBP60709 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.62□□□□□ -1.99
ACTBP60709 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.62□□□□□ -1.99
ACTBP60709 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.62□□□□□ -1.99
ACTBP60709 MIR2682-201ENST00000580305 110 ntBASIC2.62□□□□□ -1.99
ACTBP60709 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.62□□□□□ -1.99
ACTBP60709 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.62□□□□□ -1.99
ACTBP60709 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.62□□□□□ -1.99
ACTBP60709 AC015849.2-201ENST00000605738 409 ntBASIC2.62□□□□□ -1.99
ACTBP60709 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.62□□□□□ -1.99
ACTBP60709 AC013468.1-201ENST00000608680 598 ntBASIC2.62□□□□□ -1.99
ACTBP60709 AC107871.2-201ENST00000612894 502 ntBASIC2.62□□□□□ -1.99
ACTBP60709 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.62□□□□□ -1.99
ACTBP60709 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.62□□□□□ -1.99
ACTBP60709 AC103798.2-201ENST00000624292 632 ntBASIC2.62□□□□□ -1.99
ACTBP60709 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.62□□□□□ -1.99
ACTBP60709 U6.105-201ENST00000637379 88 ntBASIC2.62□□□□□ -1.99
ACTBP60709 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
ACTBP60709 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
ACTBP60709 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.62□□□□□ -1.99
ACTBP60709 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.62□□□□□ -1.99
ACTBP60709 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
ACTBP60709 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
ACTBP60709 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
ACTBP60709 ZNF519P1-201ENST00000449011 1626 ntBASIC2.61□□□□□ -1.99
ACTBP60709 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
ACTBP60709 RNA5SP72-201ENST00000364442 117 ntBASIC2.61□□□□□ -1.99
ACTBP60709 RNU6-1180P-201ENST00000364935 107 ntBASIC2.61□□□□□ -1.99
ACTBP60709 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ACTBP60709 RNU6-339P-201ENST00000384310 107 ntBASIC2.61□□□□□ -1.99
ACTBP60709 TAF9BP1-201ENST00000396646 746 ntBASIC2.61□□□□□ -1.99
ACTBP60709 GSTA8P-201ENST00000404253 637 ntBASIC2.61□□□□□ -1.99
ACTBP60709 AL513477.1-202ENST00000417061 214 ntBASIC2.61□□□□□ -1.99
ACTBP60709 AL645937.1-202ENST00000421799 937 ntBASIC2.61□□□□□ -1.99
ACTBP60709 AC097713.2-201ENST00000430199 356 ntBASIC2.61□□□□□ -1.99
ACTBP60709 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.61□□□□□ -1.99
ACTBP60709 TPTE2P1-204ENST00000435256 593 ntBASIC2.61□□□□□ -1.99
ACTBP60709 MTND2P21-201ENST00000436242 1042 ntBASIC2.61□□□□□ -1.99
ACTBP60709 YWHAZP8-201ENST00000436935 731 ntBASIC2.61□□□□□ -1.99
ACTBP60709 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.61□□□□□ -1.99
ACTBP60709 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.61□□□□□ -1.99
ACTBP60709 AC068135.1-201ENST00000446164 246 ntBASIC2.61□□□□□ -1.99
ACTBP60709 GSTA11P-201ENST00000452866 669 ntBASIC2.61□□□□□ -1.99
ACTBP60709 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.61□□□□□ -1.99
ACTBP60709 RN7SL20P-201ENST00000488827 297 ntBASIC2.61□□□□□ -1.99
ACTBP60709 AIG1P1-201ENST00000503376 148 ntBASIC2.61□□□□□ -1.99
ACTBP60709 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.61□□□□□ -1.99
ACTBP60709 GMPSP1-201ENST00000514075 579 ntBASIC2.61□□□□□ -1.99
ACTBP60709 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.61□□□□□ -1.99
ACTBP60709 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.61□□□□□ -1.99
ACTBP60709 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.61□□□□□ -1.99
ACTBP60709 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
ACTBP60709 ELOCP35-201ENST00000604289 336 ntBASIC2.61□□□□□ -1.99
ACTBP60709 AC069200.1-201ENST00000609511 323 ntBASIC2.61□□□□□ -1.99
ACTBP60709 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
ACTBP60709 AL359198.2-201ENST00000611836 194 ntBASIC2.61□□□□□ -1.99
ACTBP60709 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
ACTBP60709 ZNF90P1-201ENST00000480493 1951 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms