Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.69□□□□□ -1.82
CDH13P55290 AC024224.1-201ENST00000538284 609 ntBASIC3.69□□□□□ -1.82
CDH13P55290 AC018630.1-201ENST00000541376 925 ntBASIC3.69□□□□□ -1.82
CDH13P55290 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH13P55290 ZNF321P-202ENST00000550843 495 ntBASIC3.69□□□□□ -1.82
CDH13P55290 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.69□□□□□ -1.82
CDH13P55290 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH13P55290 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH13P55290 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.69□□□□□ -1.82
CDH13P55290 AC120057.2-201ENST00000571520 271 ntBASIC3.69□□□□□ -1.82
CDH13P55290 ISCA1P3-201ENST00000577104 373 ntBASIC3.69□□□□□ -1.82
CDH13P55290 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH13P55290 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH13P55290 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.69□□□□□ -1.82
CDH13P55290 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.69□□□□□ -1.82
CDH13P55290 AC244505.7-201ENST00000599675 272 ntBASIC3.69□□□□□ -1.82
CDH13P55290 AL133507.1-201ENST00000605269 557 ntBASIC3.69□□□□□ -1.82
CDH13P55290 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.69□□□□□ -1.82
CDH13P55290 AL390208.1-201ENST00000605885 644 ntBASIC3.69□□□□□ -1.82
CDH13P55290 MIR6716-201ENST00000613413 80 ntBASIC3.69□□□□□ -1.82
CDH13P55290 AC008147.4-201ENST00000617570 1204 ntBASIC3.69□□□□□ -1.82
CDH13P55290 AL713922.2-201ENST00000619384 716 ntBASIC3.69□□□□□ -1.82
CDH13P55290 AC018755.4-201ENST00000619715 454 ntBASIC3.69□□□□□ -1.82
CDH13P55290 MIR6758-201ENST00000620653 63 ntBASIC3.69□□□□□ -1.82
CDH13P55290 AC017037.3-201ENST00000625016 472 ntBASIC3.69□□□□□ -1.82
CDH13P55290 AC103706.2-201ENST00000638080 240 ntBASIC3.69□□□□□ -1.82
CDH13P55290 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH13P55290 AC073073.2-201ENST00000609827 2578 ntBASIC3.69□□□□□ -1.82
CDH13P55290 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CDH13P55290 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
CDH13P55290 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH13P55290 AC004925.1-201ENST00000624256 2706 ntBASIC3.69□□□□□ -1.82
CDH13P55290 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDH13P55290 USP8P1-201ENST00000494673 3183 ntBASIC3.69□□□□□ -1.82
CDH13P55290 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH13P55290 AC066616.2-201ENST00000559334 1481 ntBASIC3.68□□□□□ -1.82
CDH13P55290 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH13P55290 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH13P55290 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDH13P55290 AC087359.1-201ENST00000508335 1740 ntBASIC3.68□□□□□ -1.82
CDH13P55290 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDH13P55290 RNU6-28P-201ENST00000362378 107 ntBASIC3.68□□□□□ -1.82
CDH13P55290 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH13P55290 RNA5SP317-201ENST00000410176 116 ntBASIC3.68□□□□□ -1.82
CDH13P55290 RNA5SP311-201ENST00000411290 116 ntBASIC3.68□□□□□ -1.82
CDH13P55290 RPL30P2-201ENST00000414021 291 ntBASIC3.68□□□□□ -1.82
CDH13P55290 RAD23BP2-201ENST00000416003 1207 ntBASIC3.68□□□□□ -1.82
CDH13P55290 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH13P55290 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH13P55290 AC098592.1-201ENST00000419352 333 ntBASIC3.68□□□□□ -1.82
CDH13P55290 AC083875.1-201ENST00000419509 405 ntBASIC3.68□□□□□ -1.82
CDH13P55290 MTND4LP10-201ENST00000435146 291 ntBASIC3.68□□□□□ -1.82
CDH13P55290 MTND5P14-201ENST00000441481 1267 ntBASIC3.68□□□□□ -1.82
CDH13P55290 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH13P55290 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH13P55290 HMGB1P15-201ENST00000453854 435 ntBASIC3.68□□□□□ -1.82
CDH13P55290 BTF3P5-201ENST00000457252 467 ntBASIC3.68□□□□□ -1.82
CDH13P55290 RPS4XP10-201ENST00000465034 731 ntBASIC3.68□□□□□ -1.82
CDH13P55290 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH13P55290 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH13P55290 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH13P55290 AC026979.1-201ENST00000492525 396 ntBASIC3.68□□□□□ -1.82
CDH13P55290 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH13P55290 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH13P55290 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.68□□□□□ -1.82
CDH13P55290 RNA5SP315-201ENST00000516340 116 ntBASIC3.68□□□□□ -1.82
CDH13P55290 RN7SKP209-201ENST00000516888 304 ntBASIC3.68□□□□□ -1.82
CDH13P55290 RNA5SP312-201ENST00000517068 116 ntBASIC3.68□□□□□ -1.82
CDH13P55290 AC008802.1-201ENST00000519121 791 ntBASIC3.68□□□□□ -1.82
CDH13P55290 MTATP6P15-201ENST00000527233 835 ntBASIC3.68□□□□□ -1.82
CDH13P55290 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH13P55290 ELOCP32-201ENST00000548625 324 ntBASIC3.68□□□□□ -1.82
CDH13P55290 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDH13P55290 AC090615.1-201ENST00000577519 154 ntBASIC3.68□□□□□ -1.82
CDH13P55290 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
CDH13P55290 AL353997.4-201ENST00000586196 166 ntBASIC3.68□□□□□ -1.82
CDH13P55290 NIFKP6-201ENST00000598115 845 ntBASIC3.68□□□□□ -1.82
CDH13P55290 AC020910.2-201ENST00000603635 610 ntBASIC3.68□□□□□ -1.82
CDH13P55290 SNORA62.6-201ENST00000606322 83 ntBASIC3.68□□□□□ -1.82
CDH13P55290 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.68□□□□□ -1.82
CDH13P55290 MIR378J-201ENST00000611988 109 ntBASIC3.68□□□□□ -1.82
CDH13P55290 AL356585.4-201ENST00000623078 1229 ntBASIC3.68□□□□□ -1.82
CDH13P55290 AC079416.3-201ENST00000624479 549 ntBASIC3.68□□□□□ -1.82
CDH13P55290 AC112200.1-201ENST00000625015 234 ntBASIC3.68□□□□□ -1.82
CDH13P55290 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.68□□□□□ -1.82
CDH13P55290 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CDH13P55290 EXOC5P1-201ENST00000510543 1969 ntBASIC3.68□□□□□ -1.82
CDH13P55290 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CDH13P55290 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDH13P55290 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CDH13P55290 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
CDH13P55290 AP001350.1-201ENST00000601906 1524 ntBASIC3.67□□□□□ -1.82
CDH13P55290 RPL32P3-201ENST00000359025 275 ntBASIC3.67□□□□□ -1.82
CDH13P55290 SNORA51.2-201ENST00000364595 132 ntBASIC3.67□□□□□ -1.82
CDH13P55290 SNORA62-201ENST00000365493 153 ntBASIC3.67□□□□□ -1.82
CDH13P55290 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDH13P55290 RNU6-1200P-201ENST00000384162 107 ntBASIC3.67□□□□□ -1.82
CDH13P55290 RNU6-1181P-201ENST00000384191 106 ntBASIC3.67□□□□□ -1.82
CDH13P55290 SNORA70C-201ENST00000384538 135 ntBASIC3.67□□□□□ -1.82
CDH13P55290 CYCSP45-201ENST00000402289 315 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms