Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC009318.4-201ENST00000620496 486 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 AP005264.7-201ENST00000625003 745 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 AC244258.1-201ENST00000637553 1071 ntBASIC3.85□□□□□ -1.79
LIMK1P53667 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LIMK1P53667 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LIMK1P53667 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.85□□□□□ -1.79
LIMK1P53667 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LIMK1P53667 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LIMK1P53667 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
LIMK1P53667 AC002546.1-201ENST00000588041 2504 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
LIMK1P53667 RNA5SP235-201ENST00000365411 114 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.84□□□□□ -1.79
LIMK1P53667 RNU6-629P-201ENST00000384061 103 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 MIR506-201ENST00000384998 124 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.84□□□□□ -1.79
LIMK1P53667 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 AL583834.1-201ENST00000406943 343 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 MTCO3P12-201ENST00000416718 547 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.84□□□□□ -1.79
LIMK1P53667 AC097713.2-201ENST00000430199 356 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.84□□□□□ -1.79
LIMK1P53667 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.84□□□□□ -1.79
LIMK1P53667 CR769776.1-201ENST00000441254 787 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 RPL21P23-201ENST00000446654 460 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 RPL21P11-201ENST00000461458 483 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 AL049873.1-201ENST00000480540 376 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.84□□□□□ -1.79
LIMK1P53667 AC020699.1-201ENST00000505161 445 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.84□□□□□ -1.79
LIMK1P53667 AC116353.3-201ENST00000511215 249 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 RPL23AP94-201ENST00000512518 302 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 RNU1-61P-201ENST00000516107 151 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 RN7SKP31-201ENST00000516354 278 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 SCARNA14-201ENST00000516903 136 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.84□□□□□ -1.79
LIMK1P53667 AC007991.1-201ENST00000522680 631 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 AL139174.1-201ENST00000531489 886 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 AC063950.1-201ENST00000552036 308 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 AL389895.1-201ENST00000554127 252 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.84□□□□□ -1.79
LIMK1P53667 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.84□□□□□ -1.79
LIMK1P53667 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.84□□□□□ -1.79
LIMK1P53667 AC243312.2-201ENST00000623340 601 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.84□□□□□ -1.79
LIMK1P53667 AC120349.2-201ENST00000625002 298 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 GDI2P1-201ENST00000429312 1336 ntBASIC3.84□□□□□ -1.79
LIMK1P53667 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.84□□□□□ -1.79
LIMK1P53667 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
LIMK1P53667 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.84□□□□□ -1.79
LIMK1P53667 ZNF833P-201ENST00000424938 1494 ntBASIC3.84□□□□□ -1.8
LIMK1P53667 AP002001.2-201ENST00000529025 1469 ntBASIC3.84□□□□□ -1.8
LIMK1P53667 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.84□□□□□ -1.8
LIMK1P53667 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
LIMK1P53667 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
LIMK1P53667 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
LIMK1P53667 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
LIMK1P53667 BDP1P-201ENST00000582658 1990 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
LIMK1P53667 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
LIMK1P53667 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LIMK1P53667 DEFB109C-201ENST00000382575 264 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 DEFB109B-201ENST00000382656 264 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 SNORD3H-201ENST00000384486 214 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 SNORA48.2-201ENST00000390926 124 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.83□□□□□ -1.8
LIMK1P53667 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.83□□□□□ -1.8
LIMK1P53667 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.83□□□□□ -1.8
LIMK1P53667 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.83□□□□□ -1.8
LIMK1P53667 AC092641.1-201ENST00000440229 772 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.83□□□□□ -1.8
LIMK1P53667 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.83□□□□□ -1.8
LIMK1P53667 MTCYBP11-201ENST00000447254 1109 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 RPL12P26-201ENST00000452430 487 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 HMGB1P15-201ENST00000453854 435 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 U3.44-201ENST00000458938 192 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 PABPC1P3-201ENST00000469174 459 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 RPS27AP1-201ENST00000475545 471 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.83□□□□□ -1.8
LIMK1P53667 HMGB1P28-201ENST00000507778 552 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 AC109445.1-201ENST00000512356 383 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 RPL12P22-201ENST00000519073 490 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.83□□□□□ -1.8
LIMK1P53667 MTND4P33-201ENST00000556706 766 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.83□□□□□ -1.8
LIMK1P53667 AC006960.3-201ENST00000561845 705 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.83□□□□□ -1.8
LIMK1P53667 MIR4474-201ENST00000579189 78 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.83□□□□□ -1.8
LIMK1P53667 AC022662.1-201ENST00000580252 331 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.83□□□□□ -1.8
LIMK1P53667 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.83□□□□□ -1.8
LIMK1P53667 AC034229.4-201ENST00000607861 441 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 AC131235.4-201ENST00000609288 620 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 VIS1.1-201ENST00000610517 203 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.83□□□□□ -1.8
LIMK1P53667 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.83□□□□□ -1.8
LIMK1P53667 CYP3A51P-201ENST00000633513 256 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 AC116618.1-201ENST00000634617 774 ntBASIC3.83□□□□□ -1.8
LIMK1P53667 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms