Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RPS12P10-201ENST00000427031 377 ntBASIC5.16□□□□□ -1.58
MRE11P49959 AC073069.1-201ENST00000428657 441 ntBASIC5.16□□□□□ -1.58
MRE11P49959 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
MRE11P49959 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.16□□□□□ -1.58
MRE11P49959 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.16□□□□□ -1.58
MRE11P49959 AC098614.3-201ENST00000438957 440 ntBASIC5.16□□□□□ -1.58
MRE11P49959 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.16□□□□□ -1.58
MRE11P49959 RPL34P20-201ENST00000442771 351 ntBASIC5.16□□□□□ -1.58
MRE11P49959 snoU109.1-201ENST00000459339 135 ntBASIC5.16□□□□□ -1.58
MRE11P49959 RPL23AP56-201ENST00000460778 453 ntBASIC5.16□□□□□ -1.58
MRE11P49959 AC146944.2-203ENST00000502493 354 ntBASIC5.16□□□□□ -1.58
MRE11P49959 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
MRE11P49959 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.16□□□□□ -1.58
MRE11P49959 AC139495.1-202ENST00000513164 354 ntBASIC5.16□□□□□ -1.58
MRE11P49959 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.16□□□□□ -1.58
MRE11P49959 COX6B1P6-201ENST00000522347 255 ntBASIC5.16□□□□□ -1.58
MRE11P49959 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.16□□□□□ -1.58
MRE11P49959 PHBP17-201ENST00000528576 541 ntBASIC5.16□□□□□ -1.58
MRE11P49959 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.16□□□□□ -1.58
MRE11P49959 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.16□□□□□ -1.58
MRE11P49959 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.16□□□□□ -1.58
MRE11P49959 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.16□□□□□ -1.58
MRE11P49959 BNIP3P8-201ENST00000597863 560 ntBASIC5.16□□□□□ -1.58
MRE11P49959 RPL12P25-202ENST00000598100 674 ntBASIC5.16□□□□□ -1.58
MRE11P49959 AC008782.1-201ENST00000603386 430 ntBASIC5.16□□□□□ -1.58
MRE11P49959 AC090578.1-201ENST00000604955 591 ntBASIC5.16□□□□□ -1.58
MRE11P49959 AC016727.1-205ENST00000605437 569 ntBASIC5.16□□□□□ -1.58
MRE11P49959 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.16□□□□□ -1.58
MRE11P49959 AL445567.2-201ENST00000618935 498 ntBASIC5.16□□□□□ -1.58
MRE11P49959 AC244100.1-202ENST00000621554 382 ntBASIC5.16□□□□□ -1.58
MRE11P49959 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.16□□□□□ -1.58
MRE11P49959 AC093591.3-201ENST00000634516 308 ntBASIC5.16□□□□□ -1.58
MRE11P49959 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
MRE11P49959 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MRE11P49959 GDI2P1-201ENST00000429312 1336 ntBASIC5.16□□□□□ -1.58
MRE11P49959 DCAF13P1-201ENST00000495256 1330 ntBASIC5.16□□□□□ -1.58
MRE11P49959 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
MRE11P49959 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MRE11P49959 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
MRE11P49959 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.15□□□□□ -1.58
MRE11P49959 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
MRE11P49959 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
MRE11P49959 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
MRE11P49959 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
MRE11P49959 Y_RNA.9-201ENST00000362354 101 ntBASIC5.15□□□□□ -1.59
MRE11P49959 RNA5SP307-201ENST00000362863 116 ntBASIC5.15□□□□□ -1.59
MRE11P49959 Y_RNA.111-201ENST00000363248 100 ntBASIC5.15□□□□□ -1.59
MRE11P49959 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
MRE11P49959 Y_RNA.598-201ENST00000410480 95 ntBASIC5.15□□□□□ -1.59
MRE11P49959 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.15□□□□□ -1.59
MRE11P49959 MTATP6P27-201ENST00000416987 621 ntBASIC5.15□□□□□ -1.59
MRE11P49959 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.15□□□□□ -1.59
MRE11P49959 AC083875.1-201ENST00000419509 405 ntBASIC5.15□□□□□ -1.59
MRE11P49959 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.15□□□□□ -1.59
MRE11P49959 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.15□□□□□ -1.59
MRE11P49959 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.15□□□□□ -1.59
MRE11P49959 RPS24P8-201ENST00000431490 402 ntBASIC5.15□□□□□ -1.59
MRE11P49959 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.15□□□□□ -1.59
MRE11P49959 RPL37P21-201ENST00000435890 276 ntBASIC5.15□□□□□ -1.59
MRE11P49959 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.15□□□□□ -1.59
MRE11P49959 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.15□□□□□ -1.59
MRE11P49959 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.15□□□□□ -1.59
MRE11P49959 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.15□□□□□ -1.59
MRE11P49959 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.15□□□□□ -1.59
MRE11P49959 AF131216.2-201ENST00000512316 564 ntBASIC5.15□□□□□ -1.59
MRE11P49959 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.15□□□□□ -1.59
MRE11P49959 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.15□□□□□ -1.59
MRE11P49959 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.15□□□□□ -1.59
MRE11P49959 RPL23AP97-201ENST00000568955 471 ntBASIC5.15□□□□□ -1.59
MRE11P49959 MIR5697-201ENST00000578045 78 ntBASIC5.15□□□□□ -1.59
MRE11P49959 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.15□□□□□ -1.59
MRE11P49959 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.15□□□□□ -1.59
MRE11P49959 AC005191.1-201ENST00000603950 358 ntBASIC5.15□□□□□ -1.59
MRE11P49959 AP000907.4-201ENST00000604143 237 ntBASIC5.15□□□□□ -1.59
MRE11P49959 AL161729.4-201ENST00000604650 476 ntBASIC5.15□□□□□ -1.59
MRE11P49959 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.15□□□□□ -1.59
MRE11P49959 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.15□□□□□ -1.59
MRE11P49959 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.15□□□□□ -1.59
MRE11P49959 AC099654.10-201ENST00000640395 161 ntBASIC5.15□□□□□ -1.59
MRE11P49959 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
MRE11P49959 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
MRE11P49959 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
MRE11P49959 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.15□□□□□ -1.59
MRE11P49959 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
MRE11P49959 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
MRE11P49959 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.14□□□□□ -1.59
MRE11P49959 FAM35DP-201ENST00000323387 2712 ntBASIC5.14□□□□□ -1.59
MRE11P49959 SAMMSON-226ENST00000642089 1582 ntBASIC5.14□□□□□ -1.59
MRE11P49959 AC011155.1-201ENST00000316512 456 ntBASIC5.14□□□□□ -1.59
MRE11P49959 RNU6-115P-201ENST00000364310 107 ntBASIC5.14□□□□□ -1.59
MRE11P49959 RNU6-1151P-201ENST00000384684 107 ntBASIC5.14□□□□□ -1.59
MRE11P49959 MIR506-201ENST00000384998 124 ntBASIC5.14□□□□□ -1.59
MRE11P49959 MIR634-201ENST00000385208 97 ntBASIC5.14□□□□□ -1.59
MRE11P49959 CCNG1P1-201ENST00000406783 885 ntBASIC5.14□□□□□ -1.59
MRE11P49959 AC138393.2-201ENST00000414742 246 ntBASIC5.14□□□□□ -1.59
MRE11P49959 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.14□□□□□ -1.59
MRE11P49959 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.14□□□□□ -1.59
MRE11P49959 MTND4LP10-201ENST00000435146 291 ntBASIC5.14□□□□□ -1.59
MRE11P49959 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5.14□□□□□ -1.59
MRE11P49959 RAB11AP1-201ENST00000442978 646 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms