Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MIR4255-201ENST00000579351 72 ntBASIC2.38□□□□□ -2.03
HTTP42858 MIR3683-201ENST00000580847 82 ntBASIC2.38□□□□□ -2.03
HTTP42858 BX664608.1-201ENST00000610519 487 ntBASIC2.38□□□□□ -2.03
HTTP42858 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.38□□□□□ -2.03
HTTP42858 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.38□□□□□ -2.03
HTTP42858 AC080013.2-201ENST00000460866 323 ntBASIC2.38□□□□□ -2.03
HTTP42858 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC2.38□□□□□ -2.03
HTTP42858 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
HTTP42858 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.38□□□□□ -2.03
HTTP42858 AC068339.2-201ENST00000534395 618 ntBASIC2.38□□□□□ -2.03
HTTP42858 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
HTTP42858 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.38□□□□□ -2.03
HTTP42858 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
HTTP42858 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
HTTP42858 RNA5SP129-201ENST00000410276 118 ntBASIC2.37□□□□□ -2.03
HTTP42858 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC2.37□□□□□ -2.03
HTTP42858 AC093392.2-201ENST00000450682 337 ntBASIC2.37□□□□□ -2.03
HTTP42858 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.37□□□□□ -2.03
HTTP42858 WISP1-OT1-201ENST00000602893 642 ntBASIC2.37□□□□□ -2.03
HTTP42858 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.37□□□□□ -2.03
HTTP42858 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.37□□□□□ -2.03
HTTP42858 AC095038.3-201ENST00000634439 195 ntBASIC2.37□□□□□ -2.03
HTTP42858 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
HTTP42858 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.37□□□□□ -2.03
HTTP42858 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.37□□□□□ -2.03
HTTP42858 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HTTP42858 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
HTTP42858 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.37□□□□□ -2.03
HTTP42858 EI24P1-201ENST00000416584 867 ntBASIC2.37□□□□□ -2.03
HTTP42858 SNORD13-201ENST00000459299 104 ntBASIC2.37□□□□□ -2.03
HTTP42858 AC007182.2-201ENST00000489251 402 ntBASIC2.37□□□□□ -2.03
HTTP42858 AC026412.2-201ENST00000512270 1075 ntBASIC2.37□□□□□ -2.03
HTTP42858 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.37□□□□□ -2.03
HTTP42858 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.37□□□□□ -2.03
HTTP42858 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
HTTP42858 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.37□□□□□ -2.03
HTTP42858 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HTTP42858 AC003989.2-201ENST00000440224 169 ntBASIC2.37□□□□□ -2.03
HTTP42858 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.37□□□□□ -2.03
HTTP42858 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.37□□□□□ -2.03
HTTP42858 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.37□□□□□ -2.03
HTTP42858 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.37□□□□□ -2.03
HTTP42858 ARL2BPP2-201ENST00000550907 489 ntBASIC2.37□□□□□ -2.03
HTTP42858 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.37□□□□□ -2.03
HTTP42858 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
HTTP42858 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
HTTP42858 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
HTTP42858 NR1H5P-201ENST00000452683 1377 ntBASIC2.36□□□□□ -2.03
HTTP42858 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC2.36□□□□□ -2.03
HTTP42858 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
HTTP42858 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC2.36□□□□□ -2.03
HTTP42858 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.36□□□□□ -2.03
HTTP42858 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.36□□□□□ -2.03
HTTP42858 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.36□□□□□ -2.03
HTTP42858 AC006272.2-201ENST00000594725 163 ntBASIC2.36□□□□□ -2.03
HTTP42858 AL359198.2-201ENST00000611836 194 ntBASIC2.36□□□□□ -2.03
HTTP42858 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
HTTP42858 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.36□□□□□ -2.03
HTTP42858 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC2.36□□□□□ -2.03
HTTP42858 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
HTTP42858 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
HTTP42858 RNY1P14-201ENST00000384426 108 ntBASIC2.36□□□□□ -2.03
HTTP42858 FGF7P8-201ENST00000402994 292 ntBASIC2.36□□□□□ -2.03
HTTP42858 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.36□□□□□ -2.03
HTTP42858 RPS15AP12-201ENST00000419498 388 ntBASIC2.36□□□□□ -2.03
HTTP42858 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.36□□□□□ -2.03
HTTP42858 AC110588.1-201ENST00000559699 137 ntBASIC2.36□□□□□ -2.03
HTTP42858 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
HTTP42858 SNORA40.18-201ENST00000391200 128 ntBASIC2.35□□□□□ -2.03
HTTP42858 DNAJC19P4-201ENST00000440115 345 ntBASIC2.35□□□□□ -2.03
HTTP42858 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC2.35□□□□□ -2.03
HTTP42858 AP003467.2-201ENST00000520175 319 ntBASIC2.35□□□□□ -2.03
HTTP42858 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.35□□□□□ -2.03
HTTP42858 SNORA4-201ENST00000584302 138 ntBASIC2.35□□□□□ -2.03
HTTP42858 APOOP1-201ENST00000604695 592 ntBASIC2.35□□□□□ -2.03
HTTP42858 CU459211.1-201ENST00000635667 749 ntBASIC2.35□□□□□ -2.03
HTTP42858 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.35□□□□□ -2.03
HTTP42858 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.35□□□□□ -2.03
HTTP42858 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HTTP42858 AL391813.2-201ENST00000609113 322 ntBASIC2.35□□□□□ -2.03
HTTP42858 AC091046.2-201ENST00000620775 665 ntBASIC2.35□□□□□ -2.03
HTTP42858 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HTTP42858 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
HTTP42858 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
HTTP42858 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.35□□□□□ -2.03
HTTP42858 AC017007.3-201ENST00000479865 435 ntBASIC2.35□□□□□ -2.03
HTTP42858 AL353684.1-201ENST00000622677 1120 ntBASIC2.35□□□□□ -2.03
HTTP42858 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.35□□□□□ -2.03
HTTP42858 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HTTP42858 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HTTP42858 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.34□□□□□ -2.03
HTTP42858 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.34□□□□□ -2.03
HTTP42858 Y_RNA.295-201ENST00000364918 102 ntBASIC2.34□□□□□ -2.03
HTTP42858 OR52A4P-203ENST00000498233 1014 ntBASIC2.34□□□□□ -2.03
HTTP42858 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.34□□□□□ -2.03
HTTP42858 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.34□□□□□ -2.03
HTTP42858 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.34□□□□□ -2.03
HTTP42858 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
HTTP42858 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.34□□□□□ -2.04
HTTP42858 CACYBPP1-201ENST00000438592 684 ntBASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms