Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC068657.1-201ENST00000520807 306 ntBASIC3.15□□□□□ -1.91
RORAP35398 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.15□□□□□ -1.91
RORAP35398 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
RORAP35398 CR383656.14-201ENST00000551951 406 ntBASIC3.15□□□□□ -1.91
RORAP35398 OR4H12P-201ENST00000556269 907 ntBASIC3.15□□□□□ -1.91
RORAP35398 RPL21P12-201ENST00000559810 515 ntBASIC3.15□□□□□ -1.91
RORAP35398 HSPE1P14-201ENST00000605812 302 ntBASIC3.15□□□□□ -1.91
RORAP35398 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.15□□□□□ -1.91
RORAP35398 AC009464.1-201ENST00000615731 469 ntBASIC3.15□□□□□ -1.91
RORAP35398 AL121594.5-201ENST00000631724 573 ntBASIC3.15□□□□□ -1.91
RORAP35398 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RORAP35398 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RORAP35398 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.14□□□□□ -1.91
RORAP35398 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RORAP35398 RNU6-263P-201ENST00000363811 107 ntBASIC3.14□□□□□ -1.91
RORAP35398 RNU6-353P-201ENST00000364266 108 ntBASIC3.14□□□□□ -1.91
RORAP35398 AL583834.1-201ENST00000406943 343 ntBASIC3.14□□□□□ -1.91
RORAP35398 OR51A3P-201ENST00000413596 924 ntBASIC3.14□□□□□ -1.91
RORAP35398 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RORAP35398 UBE2V1P9-201ENST00000414760 368 ntBASIC3.14□□□□□ -1.91
RORAP35398 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.14□□□□□ -1.91
RORAP35398 AC063979.1-201ENST00000415539 377 ntBASIC3.14□□□□□ -1.91
RORAP35398 RAD23BP2-201ENST00000416003 1207 ntBASIC3.14□□□□□ -1.91
RORAP35398 GLRXP1-201ENST00000423261 334 ntBASIC3.14□□□□□ -1.91
RORAP35398 RPP40P1-201ENST00000426762 456 ntBASIC3.14□□□□□ -1.91
RORAP35398 DEFB130D-201ENST00000426866 237 ntBASIC3.14□□□□□ -1.91
RORAP35398 RPL23AP82-202ENST00000427528 469 ntBASIC3.14□□□□□ -1.91
RORAP35398 FTH1P1-201ENST00000437933 532 ntBASIC3.14□□□□□ -1.91
RORAP35398 AC006028.1-201ENST00000438379 402 ntBASIC3.14□□□□□ -1.91
RORAP35398 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RORAP35398 AL050341.1-201ENST00000447743 313 ntBASIC3.14□□□□□ -1.91
RORAP35398 OR51B8P-201ENST00000449892 769 ntBASIC3.14□□□□□ -1.91
RORAP35398 AC140076.1-201ENST00000449897 361 ntBASIC3.14□□□□□ -1.91
RORAP35398 AC093392.2-201ENST00000450682 337 ntBASIC3.14□□□□□ -1.91
RORAP35398 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.14□□□□□ -1.91
RORAP35398 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.14□□□□□ -1.91
RORAP35398 CENPBD1P1-201ENST00000464061 469 ntBASIC3.14□□□□□ -1.91
RORAP35398 RPS29P2-201ENST00000479278 136 ntBASIC3.14□□□□□ -1.91
RORAP35398 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.14□□□□□ -1.91
RORAP35398 KCTD9P5-201ENST00000504141 1170 ntBASIC3.14□□□□□ -1.91
RORAP35398 AC114967.1-201ENST00000504890 259 ntBASIC3.14□□□□□ -1.91
RORAP35398 AC104057.1-201ENST00000515547 497 ntBASIC3.14□□□□□ -1.91
RORAP35398 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.14□□□□□ -1.91
RORAP35398 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.14□□□□□ -1.91
RORAP35398 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.14□□□□□ -1.91
RORAP35398 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.14□□□□□ -1.91
RORAP35398 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.14□□□□□ -1.91
RORAP35398 BPTFP1-201ENST00000579209 492 ntBASIC3.14□□□□□ -1.91
RORAP35398 AP002906.1-201ENST00000603405 233 ntBASIC3.14□□□□□ -1.91
RORAP35398 AL158211.2-201ENST00000607282 395 ntBASIC3.14□□□□□ -1.91
RORAP35398 AP005229.2-201ENST00000609980 697 ntBASIC3.14□□□□□ -1.91
RORAP35398 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.14□□□□□ -1.91
RORAP35398 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RORAP35398 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RORAP35398 AC103988.1-201ENST00000566382 2177 ntBASIC3.14□□□□□ -1.91
RORAP35398 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
RORAP35398 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.14□□□□□ -1.91
RORAP35398 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.14□□□□□ -1.91
RORAP35398 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.13□□□□□ -1.91
RORAP35398 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
RORAP35398 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RORAP35398 RNA5SP383-201ENST00000362934 120 ntBASIC3.13□□□□□ -1.91
RORAP35398 RNA5SP374-201ENST00000362939 125 ntBASIC3.13□□□□□ -1.91
RORAP35398 RNU6-619P-201ENST00000365146 108 ntBASIC3.13□□□□□ -1.91
RORAP35398 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RORAP35398 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RORAP35398 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.13□□□□□ -1.91
RORAP35398 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.13□□□□□ -1.91
RORAP35398 RNU6-1226P-201ENST00000384317 107 ntBASIC3.13□□□□□ -1.91
RORAP35398 RNU4-47P-201ENST00000410876 114 ntBASIC3.13□□□□□ -1.91
RORAP35398 RNA5SP107-201ENST00000411358 122 ntBASIC3.13□□□□□ -1.91
RORAP35398 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.13□□□□□ -1.91
RORAP35398 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.13□□□□□ -1.91
RORAP35398 AC245291.1-201ENST00000419501 328 ntBASIC3.13□□□□□ -1.91
RORAP35398 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.13□□□□□ -1.91
RORAP35398 HSPE1P1-201ENST00000421494 318 ntBASIC3.13□□□□□ -1.91
RORAP35398 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.13□□□□□ -1.91
RORAP35398 BX679664.1-201ENST00000434429 253 ntBASIC3.13□□□□□ -1.91
RORAP35398 SNRPEP4-201ENST00000435815 279 ntBASIC3.13□□□□□ -1.91
RORAP35398 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.13□□□□□ -1.91
RORAP35398 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.13□□□□□ -1.91
RORAP35398 AC000041.1-201ENST00000439655 175 ntBASIC3.13□□□□□ -1.91
RORAP35398 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.13□□□□□ -1.91
RORAP35398 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.13□□□□□ -1.91
RORAP35398 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.13□□□□□ -1.91
RORAP35398 RPL36AP33-201ENST00000450395 310 ntBASIC3.13□□□□□ -1.91
RORAP35398 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.13□□□□□ -1.91
RORAP35398 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.13□□□□□ -1.91
RORAP35398 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.13□□□□□ -1.91
RORAP35398 AC091179.1-201ENST00000461606 579 ntBASIC3.13□□□□□ -1.91
RORAP35398 NAP1L1P3-201ENST00000462291 880 ntBASIC3.13□□□□□ -1.91
RORAP35398 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.13□□□□□ -1.91
RORAP35398 AC010301.1-201ENST00000473936 355 ntBASIC3.13□□□□□ -1.91
RORAP35398 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.13□□□□□ -1.91
RORAP35398 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.13□□□□□ -1.91
RORAP35398 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.13□□□□□ -1.91
RORAP35398 OR8K4P-201ENST00000534608 872 ntBASIC3.13□□□□□ -1.91
RORAP35398 AC092470.1-201ENST00000546187 132 ntBASIC3.13□□□□□ -1.91
RORAP35398 AC004024.1-201ENST00000549244 247 ntBASIC3.13□□□□□ -1.91
RORAP35398 NIFKP8-201ENST00000560500 874 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms