Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.98□□□□□ -1.77
HOXC13P31276 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC13P31276 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.98□□□□□ -1.77
HOXC13P31276 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.98□□□□□ -1.77
HOXC13P31276 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.98□□□□□ -1.77
HOXC13P31276 AC009237.15-201ENST00000610252 501 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 AC079395.3-201ENST00000615161 484 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 AC018816.2-201ENST00000621460 353 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 AC104985.3-201ENST00000623479 597 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HOXC13P31276 MTCO1P12-201ENST00000414273 1543 ntBASIC3.98□□□□□ -1.77
HOXC13P31276 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HOXC13P31276 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC13P31276 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HOXC13P31276 AL645568.2-201ENST00000432815 1337 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXC13P31276 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
HOXC13P31276 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC13P31276 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC13P31276 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC13P31276 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC13P31276 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC13P31276 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC13P31276 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC13P31276 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC13P31276 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
HOXC13P31276 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HOXC13P31276 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC13P31276 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC13P31276 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 RPS29P4-201ENST00000414733 161 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 AC245052.5-201ENST00000416320 649 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 AC092634.6-201ENST00000418558 192 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 AC092647.1-201ENST00000420654 287 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC13P31276 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXC13P31276 MTND4P32-201ENST00000437189 1237 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC13P31276 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.97□□□□□ -1.77
HOXC13P31276 HMGB3P6-201ENST00000444896 598 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 MTCO1P48-201ENST00000448024 1096 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXC13P31276 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXC13P31276 PNPLA4P1-201ENST00000458328 305 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC13P31276 AC105914.1-201ENST00000511798 226 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC13P31276 RNA5SP164-201ENST00000516533 110 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 AP001189.2-201ENST00000527320 189 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC13P31276 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC13P31276 AC018630.1-201ENST00000541376 925 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC13P31276 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.97□□□□□ -1.77
HOXC13P31276 AC008088.1-201ENST00000580993 280 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 AC006329.2-201ENST00000611491 394 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 AC092140.2-201ENST00000618027 521 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 AC084824.4-201ENST00000620106 731 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 AC123767.1-202ENST00000620407 817 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 OR1S1-201ENST00000624470 978 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
HOXC13P31276 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC13P31276 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC13P31276 AC027287.1-201ENST00000553115 1453 ntBASIC3.97□□□□□ -1.77
HOXC13P31276 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.97□□□□□ -1.77
HOXC13P31276 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.97□□□□□ -1.77
HOXC13P31276 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC13P31276 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HOXC13P31276 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HOXC13P31276 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HOXC13P31276 AC093536.2-201ENST00000565257 1406 ntBASIC3.96□□□□□ -1.77
HOXC13P31276 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
HOXC13P31276 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC13P31276 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC13P31276 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXC13P31276 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC13P31276 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC13P31276 RNU5E-10P-201ENST00000363506 118 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 Y_RNA.318-201ENST00000365131 97 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 SUGT1P1-201ENST00000379514 476 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC13P31276 SOD2P1-201ENST00000396543 562 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 RPS3AP26-201ENST00000398259 784 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXC13P31276 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC13P31276 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXC13P31276 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC13P31276 RPL21P32-201ENST00000419877 477 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 AC099677.1-201ENST00000420575 175 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 FNDC3CP-201ENST00000420795 1155 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC13P31276 AL035410.1-201ENST00000427409 427 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXC13P31276 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXC13P31276 SNRPEP4-201ENST00000435815 279 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 HSPD1P21-201ENST00000436541 245 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms