Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
HLA-DMAP28067 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DMAP28067 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DMAP28067 LINC00557-201ENST00000563184 1279 ntBASIC2.65□□□□□ -1.99
HLA-DMAP28067 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DMAP28067 AP005205.1-201ENST00000563503 508 ntBASIC2.65□□□□□ -1.99
HLA-DMAP28067 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.65□□□□□ -1.99
HLA-DMAP28067 MIR4276-201ENST00000584832 70 ntBASIC2.65□□□□□ -1.99
HLA-DMAP28067 GLUD1P4-201ENST00000590914 418 ntBASIC2.65□□□□□ -1.99
HLA-DMAP28067 AC022916.3-201ENST00000592961 742 ntBASIC2.65□□□□□ -1.99
HLA-DMAP28067 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DMAP28067 AC091057.2-201ENST00000602594 792 ntBASIC2.65□□□□□ -1.99
HLA-DMAP28067 AL133507.1-201ENST00000605269 557 ntBASIC2.65□□□□□ -1.99
HLA-DMAP28067 AC021851.1-201ENST00000608537 1082 ntBASIC2.65□□□□□ -1.99
HLA-DMAP28067 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
HLA-DMAP28067 AL020991.1-201ENST00000612314 373 ntBASIC2.65□□□□□ -1.99
HLA-DMAP28067 FRG1HP-204ENST00000617940 757 ntBASIC2.65□□□□□ -1.99
HLA-DMAP28067 AC073569.3-201ENST00000619055 682 ntBASIC2.65□□□□□ -1.99
HLA-DMAP28067 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DMAP28067 MTCO1P18-201ENST00000455518 1419 ntBASIC2.65□□□□□ -1.99
HLA-DMAP28067 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.65□□□□□ -1.99
HLA-DMAP28067 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DMAP28067 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DMAP28067 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DMAP28067 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DMAP28067 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DMAP28067 RNU6-989P-201ENST00000362756 107 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 RNVU1-3-201ENST00000364313 161 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 RNU6-444P-201ENST00000383988 108 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 RNU6-481P-201ENST00000384194 107 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 AC025750.1-201ENST00000399891 379 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 AL139095.1-201ENST00000404326 391 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 RN7SKP220-201ENST00000410611 288 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 USP9YP19-201ENST00000412165 485 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 BX323014.1-201ENST00000412876 237 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 RPL26P28-201ENST00000451325 435 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 RBMY2UP-201ENST00000453474 324 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 RN7SL385P-201ENST00000468873 276 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 PRDX3P4-201ENST00000470828 747 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 RPS17P11-201ENST00000474297 293 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 RPS4XP6-201ENST00000477670 797 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 CEACAMP10-202ENST00000495431 496 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DMAP28067 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DMAP28067 RNU6-202P-201ENST00000515998 96 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 SNORA76.2-201ENST00000517095 137 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 OR10V3P-201ENST00000525712 725 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 AC107016.2-201ENST00000547968 190 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 HIGD1AP1-201ENST00000550979 275 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DMAP28067 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 AC104229.1-201ENST00000561364 255 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 AL021368.1-201ENST00000607490 540 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 AC004696.1-201ENST00000614345 607 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 AC002064.3-201ENST00000623448 346 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 MTND2P41-201ENST00000637599 773 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DMAP28067 AL161431.1-201ENST00000618966 4205 ntBASIC2.64□□□□□ -1.99
HLA-DMAP28067 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HLA-DMAP28067 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
HLA-DMAP28067 AC011460.1-201ENST00000636268 1834 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DMAP28067 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DMAP28067 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 RPL9P7-201ENST00000330965 580 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DMAP28067 U3.42-201ENST00000408746 214 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 AL158050.1-201ENST00000416077 457 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 AC073310.1-201ENST00000423226 1033 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.63□□□□□ -1.99
HLA-DMAP28067 MTND4P15-201ENST00000437913 1033 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 AC108734.1-201ENST00000439549 399 ntBASIC2.63□□□□□ -1.99
HLA-DMAP28067 RPL23AP20-201ENST00000447965 421 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms