Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.83□□□□□ -1.48
ERCC3P19447 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.83□□□□□ -1.48
ERCC3P19447 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.83□□□□□ -1.48
ERCC3P19447 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
ERCC3P19447 HMGB1P6-201ENST00000569046 646 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 AL049634.3-201ENST00000604968 457 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 AL354950.2-201ENST00000617939 290 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 AC022106.2-201ENST00000620114 757 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 YWHAEP7-203ENST00000622054 312 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.83□□□□□ -1.48
ERCC3P19447 MIR7641-1-201ENST00000627518 61 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.83□□□□□ -1.48
ERCC3P19447 AL731566.1-201ENST00000620490 1937 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 AL592182.3-201ENST00000642132 3304 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ERCC3P19447 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ERCC3P19447 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ERCC3P19447 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ERCC3P19447 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.83□□□□□ -1.48
ERCC3P19447 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.83□□□□□ -1.48
ERCC3P19447 SDAD1P1-202ENST00000524156 2051 ntBASIC5.83□□□□□ -1.48
ERCC3P19447 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.82□□□□□ -1.48
ERCC3P19447 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.82□□□□□ -1.48
ERCC3P19447 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC3P19447 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC3P19447 SMG1P4-204ENST00000523028 4131 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC3P19447 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC3P19447 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC3P19447 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC3P19447 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC3P19447 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.82□□□□□ -1.48
ERCC3P19447 RPL21P67-201ENST00000402896 478 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 RAB28P1-201ENST00000411517 641 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC3P19447 FABP7P1-201ENST00000424004 391 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC3P19447 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.82□□□□□ -1.48
ERCC3P19447 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.82□□□□□ -1.48
ERCC3P19447 RPS20P5-201ENST00000434808 360 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 SEPT14P3-201ENST00000439401 183 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 MTCO3P18-201ENST00000440206 761 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 AL732372.2-207ENST00000445840 183 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 AL354714.3-201ENST00000447284 493 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 MTND5P20-201ENST00000448677 143 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 AC090804.1-201ENST00000448870 490 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 SEPT14P2-201ENST00000453405 183 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 RN7SL443P-201ENST00000464331 290 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.82□□□□□ -1.48
ERCC3P19447 RPL5P30-201ENST00000465511 891 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.82□□□□□ -1.48
ERCC3P19447 AC090686.1-201ENST00000481577 749 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC3P19447 GAPDHP56-201ENST00000506031 988 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.82□□□□□ -1.48
ERCC3P19447 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.82□□□□□ -1.48
ERCC3P19447 SEPT14P4-201ENST00000513445 186 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 RNU6-358P-201ENST00000516564 75 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 FO082796.1-201ENST00000523795 183 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.82□□□□□ -1.48
ERCC3P19447 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.82□□□□□ -1.48
ERCC3P19447 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.82□□□□□ -1.48
ERCC3P19447 MIR3667-201ENST00000581025 74 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 MIR7853-201ENST00000584820 132 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 AL512782.1-201ENST00000603093 364 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.82□□□□□ -1.48
ERCC3P19447 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.82□□□□□ -1.48
ERCC3P19447 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.82□□□□□ -1.48
ERCC3P19447 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.82□□□□□ -1.48
ERCC3P19447 MTND5P3-201ENST00000438536 1800 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
ERCC3P19447 AC009951.1-201ENST00000623674 2614 ntBASIC5.82□□□□□ -1.48
ERCC3P19447 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC3P19447 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC3P19447 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC3P19447 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.82□□□□□ -1.48
ERCC3P19447 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ERCC3P19447 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC3P19447 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC3P19447 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC3P19447 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.81□□□□□ -1.48
ERCC3P19447 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC3P19447 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC3P19447 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
ERCC3P19447 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC3P19447 RNU6-223P-201ENST00000362830 107 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 RN7SKP113-201ENST00000363891 295 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 RNA5SP505-201ENST00000364748 108 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 OR1L6-202ENST00000373684 1044 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
ERCC3P19447 MT-TL1-201ENST00000386347 75 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.81□□□□□ -1.48
ERCC3P19447 HSPD1P16-201ENST00000402302 394 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.81□□□□□ -1.48
ERCC3P19447 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.81□□□□□ -1.48
ERCC3P19447 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.81□□□□□ -1.48
ERCC3P19447 AL121871.1-201ENST00000443413 436 ntBASIC5.81□□□□□ -1.48
ERCC3P19447 AC073264.2-201ENST00000448886 166 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms