Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MFSD8-245ENST00000641743 948 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
XRCC1P18887 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.32□□□□□ -1.88
XRCC1P18887 AC130650.2-201ENST00000618736 2403 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.32□□□□□ -1.88
XRCC1P18887 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
XRCC1P18887 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
XRCC1P18887 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
XRCC1P18887 SRP72P2-201ENST00000344851 1979 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
XRCC1P18887 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
XRCC1P18887 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
XRCC1P18887 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 MTND4P9-201ENST00000507819 1346 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
XRCC1P18887 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
XRCC1P18887 MIR148B-201ENST00000362252 99 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 RNU6-492P-201ENST00000363035 104 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 RNU6-374P-201ENST00000364146 108 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 RNVU1-3-201ENST00000364313 161 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 RNA5SP189-201ENST00000364920 115 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
XRCC1P18887 MIR591-201ENST00000385290 95 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 RNU6-837P-201ENST00000391056 108 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 SNORA11.1-201ENST00000408133 129 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 RNA5SP56-201ENST00000410277 118 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 RNA5SP120-201ENST00000410900 112 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.31□□□□□ -1.88
XRCC1P18887 DPRXP1-201ENST00000426312 460 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.31□□□□□ -1.88
XRCC1P18887 ISCA1P2-201ENST00000438679 421 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.31□□□□□ -1.88
XRCC1P18887 AC104978.1-201ENST00000449387 391 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 snoU13.3-201ENST00000459441 104 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.31□□□□□ -1.88
XRCC1P18887 RPS4XP10-201ENST00000465034 731 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 AC079203.1-201ENST00000487972 404 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 RPL21P13-201ENST00000488305 481 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.31□□□□□ -1.88
XRCC1P18887 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.31□□□□□ -1.88
XRCC1P18887 AC107934.2-201ENST00000518653 310 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.31□□□□□ -1.88
XRCC1P18887 OR5D17P-201ENST00000531492 978 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
XRCC1P18887 YWHAZP1-201ENST00000556286 722 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.31□□□□□ -1.88
XRCC1P18887 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.31□□□□□ -1.88
XRCC1P18887 AC067852.3-201ENST00000589177 561 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 AL606834.3-201ENST00000602615 496 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 AL354976.1-201ENST00000613843 387 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.31□□□□□ -1.88
XRCC1P18887 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
XRCC1P18887 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
XRCC1P18887 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
XRCC1P18887 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
XRCC1P18887 Z83843.1-201ENST00000604070 3685 ntBASIC3.31□□□□□ -1.88
XRCC1P18887 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.3□□□□□ -1.88
XRCC1P18887 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
XRCC1P18887 RNA5SP383-201ENST00000362934 120 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 U3.19-201ENST00000390893 196 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 Y_RNA.578-201ENST00000390903 88 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 RNU6-1176P-201ENST00000390955 107 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 RNU6-1300P-201ENST00000391046 108 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 RPL31P1-201ENST00000398116 372 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.3□□□□□ -1.88
XRCC1P18887 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.3□□□□□ -1.88
XRCC1P18887 AL356968.1-201ENST00000416622 474 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 BOLA3P4-201ENST00000418151 400 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 RPF2P1-201ENST00000424137 906 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 AC005300.1-201ENST00000428401 373 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 AC005326.1-201ENST00000429197 123 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 MTCO1P3-201ENST00000429327 192 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 RPL31P54-201ENST00000429803 370 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.3□□□□□ -1.88
XRCC1P18887 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.3□□□□□ -1.88
XRCC1P18887 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.3□□□□□ -1.88
XRCC1P18887 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.3□□□□□ -1.88
XRCC1P18887 OR5H5P-201ENST00000503164 928 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 AC084024.2-201ENST00000503480 791 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
XRCC1P18887 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.3□□□□□ -1.88
XRCC1P18887 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.3□□□□□ -1.88
XRCC1P18887 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.3□□□□□ -1.88
XRCC1P18887 MIR3908-201ENST00000579798 126 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.3□□□□□ -1.88
XRCC1P18887 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.3□□□□□ -1.88
XRCC1P18887 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.3□□□□□ -1.88
XRCC1P18887 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.3□□□□□ -1.88
XRCC1P18887 AC112220.2-201ENST00000605513 533 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 HMGN2P28-201ENST00000606102 262 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 AC097504.2-201ENST00000608088 454 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 AC099778.2-201ENST00000610904 211 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 PLCE1P1-201ENST00000622094 305 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 AC004808.1-201ENST00000627671 721 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.3□□□□□ -1.88
XRCC1P18887 SNORA50A-202ENST00000629536 136 ntBASIC3.3□□□□□ -1.88
XRCC1P18887 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
XRCC1P18887 AC127502.3-201ENST00000636170 1206 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms