Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL023284.1-201ENST00000403956 276 ntBASIC2.67□□□□□ -1.98
COL11A1P12107 AL024474.1-201ENST00000404655 591 ntBASIC2.67□□□□□ -1.98
COL11A1P12107 SNORD88.1-201ENST00000408684 91 ntBASIC2.67□□□□□ -1.98
COL11A1P12107 MTCO2P17-201ENST00000424336 677 ntBASIC2.67□□□□□ -1.98
COL11A1P12107 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.67□□□□□ -1.98
COL11A1P12107 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.67□□□□□ -1.98
COL11A1P12107 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.67□□□□□ -1.98
COL11A1P12107 RPL7P12-201ENST00000446719 750 ntBASIC2.67□□□□□ -1.98
COL11A1P12107 AP000926.1-201ENST00000479573 241 ntBASIC2.67□□□□□ -1.98
COL11A1P12107 RPL21P99-201ENST00000480369 423 ntBASIC2.67□□□□□ -1.98
COL11A1P12107 NPM1P52-201ENST00000518264 846 ntBASIC2.67□□□□□ -1.98
COL11A1P12107 IGKV2-36-201ENST00000519999 223 ntBASIC2.67□□□□□ -1.98
COL11A1P12107 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
COL11A1P12107 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.67□□□□□ -1.98
COL11A1P12107 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.67□□□□□ -1.98
COL11A1P12107 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.67□□□□□ -1.98
COL11A1P12107 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.67□□□□□ -1.98
COL11A1P12107 AL592494.3-201ENST00000609485 464 ntBASIC2.67□□□□□ -1.98
COL11A1P12107 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
COL11A1P12107 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
COL11A1P12107 RN7SKP32-201ENST00000410167 303 ntBASIC2.66□□□□□ -1.98
COL11A1P12107 AL590103.1-201ENST00000434488 307 ntBASIC2.66□□□□□ -1.98
COL11A1P12107 RPL36AP6-201ENST00000435770 321 ntBASIC2.66□□□□□ -1.98
COL11A1P12107 AC096638.1-201ENST00000444678 216 ntBASIC2.66□□□□□ -1.98
COL11A1P12107 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
COL11A1P12107 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.66□□□□□ -1.98
COL11A1P12107 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.66□□□□□ -1.98
COL11A1P12107 AC068446.3-201ENST00000555285 382 ntBASIC2.66□□□□□ -1.98
COL11A1P12107 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.66□□□□□ -1.98
COL11A1P12107 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.66□□□□□ -1.98
COL11A1P12107 MIR4506-201ENST00000584693 77 ntBASIC2.66□□□□□ -1.98
COL11A1P12107 TPMTP1-201ENST00000592307 737 ntBASIC2.66□□□□□ -1.98
COL11A1P12107 PSMA6P4-201ENST00000603247 718 ntBASIC2.66□□□□□ -1.98
COL11A1P12107 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.66□□□□□ -1.98
COL11A1P12107 AC007620.3-201ENST00000608131 497 ntBASIC2.66□□□□□ -1.98
COL11A1P12107 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.66□□□□□ -1.98
COL11A1P12107 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.66□□□□□ -1.98
COL11A1P12107 AC110792.3-201ENST00000595906 1614 ntBASIC2.66□□□□□ -1.98
COL11A1P12107 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.66□□□□□ -1.98
COL11A1P12107 SYT14P1-202ENST00000600441 1448 ntBASIC2.66□□□□□ -1.98
COL11A1P12107 RPL21P132-201ENST00000331267 462 ntBASIC2.65□□□□□ -1.98
COL11A1P12107 MTCO3P17-201ENST00000443775 513 ntBASIC2.65□□□□□ -1.98
COL11A1P12107 COX6CP2-201ENST00000444980 225 ntBASIC2.65□□□□□ -1.98
COL11A1P12107 RPL36AP33-201ENST00000450395 310 ntBASIC2.65□□□□□ -1.98
COL11A1P12107 GAPDHP39-201ENST00000481866 979 ntBASIC2.65□□□□□ -1.98
COL11A1P12107 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.65□□□□□ -1.98
COL11A1P12107 RN7SKP31-201ENST00000516354 278 ntBASIC2.65□□□□□ -1.98
COL11A1P12107 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.65□□□□□ -1.98
COL11A1P12107 MTCYBP20-201ENST00000524239 1129 ntBASIC2.65□□□□□ -1.98
COL11A1P12107 AC103710.3-201ENST00000608157 948 ntBASIC2.65□□□□□ -1.98
COL11A1P12107 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.65□□□□□ -1.98
COL11A1P12107 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.65□□□□□ -1.98
COL11A1P12107 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
COL11A1P12107 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
COL11A1P12107 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
COL11A1P12107 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
COL11A1P12107 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
COL11A1P12107 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
COL11A1P12107 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
COL11A1P12107 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
COL11A1P12107 AC009501.3-201ENST00000605001 1352 ntBASIC2.65□□□□□ -1.99
COL11A1P12107 RNA5SP456-201ENST00000364002 114 ntBASIC2.65□□□□□ -1.99
COL11A1P12107 SNORD6-201ENST00000365444 73 ntBASIC2.65□□□□□ -1.99
COL11A1P12107 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.99
COL11A1P12107 AL355994.1-201ENST00000424379 260 ntBASIC2.65□□□□□ -1.99
COL11A1P12107 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.65□□□□□ -1.99
COL11A1P12107 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.65□□□□□ -1.99
COL11A1P12107 RPL9P32-201ENST00000464118 620 ntBASIC2.65□□□□□ -1.99
COL11A1P12107 RPS27P27-201ENST00000498779 255 ntBASIC2.65□□□□□ -1.99
COL11A1P12107 XKRY-201ENST00000510392 1100 ntBASIC2.65□□□□□ -1.99
COL11A1P12107 RNA5SP458-201ENST00000516188 119 ntBASIC2.65□□□□□ -1.99
COL11A1P12107 RNA5SP281-201ENST00000516504 135 ntBASIC2.65□□□□□ -1.99
COL11A1P12107 RN7SKP244-201ENST00000516513 307 ntBASIC2.65□□□□□ -1.99
COL11A1P12107 SEC11B-201ENST00000518383 499 ntBASIC2.65□□□□□ -1.99
COL11A1P12107 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.65□□□□□ -1.99
COL11A1P12107 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
COL11A1P12107 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.65□□□□□ -1.99
COL11A1P12107 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
COL11A1P12107 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.65□□□□□ -1.99
COL11A1P12107 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.65□□□□□ -1.99
COL11A1P12107 AC068714.1-201ENST00000559623 800 ntBASIC2.65□□□□□ -1.99
COL11A1P12107 AC026634.1-201ENST00000634369 198 ntBASIC2.65□□□□□ -1.99
COL11A1P12107 HSPA8P4-201ENST00000511877 1920 ntBASIC2.65□□□□□ -1.99
COL11A1P12107 AC092326.2-201ENST00000624772 1561 ntBASIC2.65□□□□□ -1.99
COL11A1P12107 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.99
COL11A1P12107 RNU6-697P-201ENST00000363348 107 ntBASIC2.64□□□□□ -1.99
COL11A1P12107 DYNLT3P1-201ENST00000378574 347 ntBASIC2.64□□□□□ -1.99
COL11A1P12107 RNU6-253P-201ENST00000384730 105 ntBASIC2.64□□□□□ -1.99
COL11A1P12107 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.64□□□□□ -1.99
COL11A1P12107 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.64□□□□□ -1.99
COL11A1P12107 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.64□□□□□ -1.99
COL11A1P12107 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.64□□□□□ -1.99
COL11A1P12107 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.64□□□□□ -1.99
COL11A1P12107 RPL30P9-201ENST00000465586 330 ntBASIC2.64□□□□□ -1.99
COL11A1P12107 RPL23AP49-201ENST00000492925 468 ntBASIC2.64□□□□□ -1.99
COL11A1P12107 AC106872.3-201ENST00000495104 446 ntBASIC2.64□□□□□ -1.99
COL11A1P12107 BLNK-209ENST00000495266 440 ntTSL 5 BASIC2.64□□□□□ -1.99
COL11A1P12107 AC107222.1-201ENST00000510899 637 ntBASIC2.64□□□□□ -1.99
COL11A1P12107 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
COL11A1P12107 RNA5SP385-201ENST00000515947 110 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms