Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.46□□□□□ -1.7
RHOP08100 C1DP2-201ENST00000418167 426 ntBASIC4.46□□□□□ -1.7
RHOP08100 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.46□□□□□ -1.7
RHOP08100 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.46□□□□□ -1.7
RHOP08100 EIF1P3-201ENST00000423841 334 ntBASIC4.46□□□□□ -1.7
RHOP08100 SKP1P1-201ENST00000438081 489 ntBASIC4.46□□□□□ -1.7
RHOP08100 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.46□□□□□ -1.7
RHOP08100 RPS26P2-201ENST00000440331 348 ntBASIC4.46□□□□□ -1.7
RHOP08100 RABEPKP1-201ENST00000440529 1026 ntBASIC4.46□□□□□ -1.7
RHOP08100 MTND6P13-201ENST00000443510 523 ntBASIC4.46□□□□□ -1.7
RHOP08100 MTATP6P30-201ENST00000443540 664 ntBASIC4.46□□□□□ -1.7
RHOP08100 VN1R34P-201ENST00000447387 883 ntBASIC4.46□□□□□ -1.7
RHOP08100 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.46□□□□□ -1.7
RHOP08100 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.46□□□□□ -1.7
RHOP08100 AC027673.1-201ENST00000456245 405 ntBASIC4.46□□□□□ -1.7
RHOP08100 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.46□□□□□ -1.7
RHOP08100 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.46□□□□□ -1.7
RHOP08100 RN7SL132P-201ENST00000478131 296 ntBASIC4.46□□□□□ -1.7
RHOP08100 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RHOP08100 ACTR3P3-201ENST00000480448 893 ntBASIC4.46□□□□□ -1.7
RHOP08100 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.46□□□□□ -1.7
RHOP08100 NDUFB4P2-201ENST00000509515 391 ntBASIC4.46□□□□□ -1.7
RHOP08100 AC008549.1-201ENST00000512900 643 ntBASIC4.46□□□□□ -1.7
RHOP08100 AC018797.3-201ENST00000513388 1241 ntBASIC4.46□□□□□ -1.7
RHOP08100 SNORA18.6-201ENST00000516792 115 ntBASIC4.46□□□□□ -1.7
RHOP08100 RNU6-528P-201ENST00000516926 100 ntBASIC4.46□□□□□ -1.7
RHOP08100 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
RHOP08100 AC023632.4-201ENST00000517783 191 ntBASIC4.46□□□□□ -1.7
RHOP08100 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.46□□□□□ -1.7
RHOP08100 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.46□□□□□ -1.7
RHOP08100 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.46□□□□□ -1.7
RHOP08100 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.46□□□□□ -1.7
RHOP08100 OR5AP1P-201ENST00000529730 940 ntBASIC4.46□□□□□ -1.7
RHOP08100 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RHOP08100 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RHOP08100 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.46□□□□□ -1.7
RHOP08100 AL352979.3-201ENST00000553515 247 ntBASIC4.46□□□□□ -1.7
RHOP08100 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.46□□□□□ -1.7
RHOP08100 MIR8069-1-201ENST00000616627 86 ntBASIC4.46□□□□□ -1.7
RHOP08100 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.46□□□□□ -1.7
RHOP08100 MIR6875-201ENST00000617506 72 ntBASIC4.46□□□□□ -1.7
RHOP08100 AC072046.2-201ENST00000618366 268 ntBASIC4.46□□□□□ -1.7
RHOP08100 MIR8069-2-201ENST00000621412 86 ntBASIC4.46□□□□□ -1.7
RHOP08100 AC015871.5-202ENST00000623252 701 ntBASIC4.46□□□□□ -1.7
RHOP08100 AC124864.2-201ENST00000624736 186 ntBASIC4.46□□□□□ -1.7
RHOP08100 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.46□□□□□ -1.7
RHOP08100 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.46□□□□□ -1.7
RHOP08100 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RHOP08100 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RHOP08100 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RHOP08100 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RHOP08100 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RHOP08100 AP002907.1-201ENST00000606361 1430 ntBASIC4.46□□□□□ -1.7
RHOP08100 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
RHOP08100 Z95327.2-201ENST00000414579 1873 ntBASIC4.45□□□□□ -1.7
RHOP08100 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHOP08100 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.45□□□□□ -1.7
RHOP08100 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHOP08100 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHOP08100 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RHOP08100 RNU1-20P-201ENST00000363314 162 ntBASIC4.45□□□□□ -1.7
RHOP08100 Y_RNA.256-201ENST00000364594 104 ntBASIC4.45□□□□□ -1.7
RHOP08100 RNU6-809P-201ENST00000384461 107 ntBASIC4.45□□□□□ -1.7
RHOP08100 ENSAP1-201ENST00000392855 326 ntBASIC4.45□□□□□ -1.7
RHOP08100 RN7SKP202-201ENST00000410439 330 ntBASIC4.45□□□□□ -1.7
RHOP08100 TPMTP2-201ENST00000414372 726 ntBASIC4.45□□□□□ -1.7
RHOP08100 RPS3AP9-201ENST00000417027 792 ntBASIC4.45□□□□□ -1.7
RHOP08100 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.45□□□□□ -1.7
RHOP08100 RPL7P2-201ENST00000427639 268 ntBASIC4.45□□□□□ -1.7
RHOP08100 RPEP2-201ENST00000432149 701 ntBASIC4.45□□□□□ -1.7
RHOP08100 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.45□□□□□ -1.7
RHOP08100 MTND5P14-201ENST00000441481 1267 ntBASIC4.45□□□□□ -1.7
RHOP08100 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHOP08100 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.45□□□□□ -1.7
RHOP08100 IFNWP4-201ENST00000453148 294 ntBASIC4.45□□□□□ -1.7
RHOP08100 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.45□□□□□ -1.7
RHOP08100 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.45□□□□□ -1.7
RHOP08100 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.45□□□□□ -1.7
RHOP08100 AC146507.1-201ENST00000468335 354 ntBASIC4.45□□□□□ -1.7
RHOP08100 FCF1P3-201ENST00000496394 590 ntBASIC4.45□□□□□ -1.7
RHOP08100 AC112204.1-201ENST00000502591 103 ntBASIC4.45□□□□□ -1.7
RHOP08100 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.45□□□□□ -1.7
RHOP08100 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.45□□□□□ -1.7
RHOP08100 AC024589.1-201ENST00000512207 263 ntBASIC4.45□□□□□ -1.7
RHOP08100 SNORD116-26-201ENST00000516006 96 ntBASIC4.45□□□□□ -1.7
RHOP08100 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.45□□□□□ -1.7
RHOP08100 AP003467.2-201ENST00000520175 319 ntBASIC4.45□□□□□ -1.7
RHOP08100 COX6CP8-201ENST00000522620 226 ntBASIC4.45□□□□□ -1.7
RHOP08100 ZNF705CP-201ENST00000530515 889 ntBASIC4.45□□□□□ -1.7
RHOP08100 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.45□□□□□ -1.7
RHOP08100 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.45□□□□□ -1.7
RHOP08100 AC008127.2-201ENST00000549925 1075 ntBASIC4.45□□□□□ -1.7
RHOP08100 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.45□□□□□ -1.7
RHOP08100 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.45□□□□□ -1.7
RHOP08100 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.45□□□□□ -1.7
RHOP08100 MIR4429-201ENST00000580105 73 ntBASIC4.45□□□□□ -1.7
RHOP08100 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.45□□□□□ -1.7
RHOP08100 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.45□□□□□ -1.7
RHOP08100 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.45□□□□□ -1.7
RHOP08100 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms