Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.38□□□□□ -1.71
DDX58O95786 OR4P1P-201ENST00000530808 1136 ntBASIC4.38□□□□□ -1.71
DDX58O95786 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.38□□□□□ -1.71
DDX58O95786 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.38□□□□□ -1.71
DDX58O95786 AC026333.2-201ENST00000542164 106 ntBASIC4.38□□□□□ -1.71
DDX58O95786 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.38□□□□□ -1.71
DDX58O95786 AC006270.2-201ENST00000578523 652 ntBASIC4.38□□□□□ -1.71
DDX58O95786 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.38□□□□□ -1.71
DDX58O95786 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.38□□□□□ -1.71
DDX58O95786 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.38□□□□□ -1.71
DDX58O95786 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.38□□□□□ -1.71
DDX58O95786 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
DDX58O95786 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDX58O95786 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.38□□□□□ -1.71
DDX58O95786 CR381670.1-201ENST00000624291 1693 ntBASIC4.38□□□□□ -1.71
DDX58O95786 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
DDX58O95786 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
DDX58O95786 NUP58P1-201ENST00000502546 1738 ntBASIC4.38□□□□□ -1.71
DDX58O95786 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DDX58O95786 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DDX58O95786 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DDX58O95786 AP000568.1-201ENST00000282964 442 ntBASIC4.37□□□□□ -1.71
DDX58O95786 RNU6-216P-201ENST00000363282 104 ntBASIC4.37□□□□□ -1.71
DDX58O95786 RNA5SP322-201ENST00000363617 119 ntBASIC4.37□□□□□ -1.71
DDX58O95786 RNU4-92P-201ENST00000363783 136 ntBASIC4.37□□□□□ -1.71
DDX58O95786 RNA5SP189-201ENST00000364920 115 ntBASIC4.37□□□□□ -1.71
DDX58O95786 SNORD116.1-201ENST00000365628 92 ntBASIC4.37□□□□□ -1.71
DDX58O95786 Y_RNA.465-201ENST00000384293 102 ntBASIC4.37□□□□□ -1.71
DDX58O95786 RNU6-821P-201ENST00000390995 107 ntBASIC4.37□□□□□ -1.71
DDX58O95786 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.37□□□□□ -1.71
DDX58O95786 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX58O95786 RPS29P31-201ENST00000446147 164 ntBASIC4.37□□□□□ -1.71
DDX58O95786 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX58O95786 USP9YP25-201ENST00000457708 443 ntBASIC4.37□□□□□ -1.71
DDX58O95786 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX58O95786 AP006245.1-201ENST00000522549 120 ntBASIC4.37□□□□□ -1.71
DDX58O95786 AP001636.2-201ENST00000525517 696 ntBASIC4.37□□□□□ -1.71
DDX58O95786 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX58O95786 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.37□□□□□ -1.71
DDX58O95786 OR5AP1P-201ENST00000529730 940 ntBASIC4.37□□□□□ -1.71
DDX58O95786 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX58O95786 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.37□□□□□ -1.71
DDX58O95786 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.37□□□□□ -1.71
DDX58O95786 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX58O95786 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.37□□□□□ -1.71
DDX58O95786 AC099489.2-201ENST00000574976 260 ntBASIC4.37□□□□□ -1.71
DDX58O95786 BNIP3P24-201ENST00000593398 557 ntBASIC4.37□□□□□ -1.71
DDX58O95786 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.37□□□□□ -1.71
DDX58O95786 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.37□□□□□ -1.71
DDX58O95786 AC004987.4-201ENST00000603383 338 ntBASIC4.37□□□□□ -1.71
DDX58O95786 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.37□□□□□ -1.71
DDX58O95786 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.37□□□□□ -1.71
DDX58O95786 AC120349.2-201ENST00000625002 298 ntBASIC4.37□□□□□ -1.71
DDX58O95786 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.37□□□□□ -1.71
DDX58O95786 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.37□□□□□ -1.71
DDX58O95786 U6.101-201ENST00000637707 76 ntBASIC4.37□□□□□ -1.71
DDX58O95786 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
DDX58O95786 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.37□□□□□ -1.71
DDX58O95786 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.37□□□□□ -1.71
DDX58O95786 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.37□□□□□ -1.71
DDX58O95786 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
DDX58O95786 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
DDX58O95786 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DDX58O95786 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
DDX58O95786 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DDX58O95786 RNU6-335P-201ENST00000364563 113 ntBASIC4.36□□□□□ -1.71
DDX58O95786 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.36□□□□□ -1.71
DDX58O95786 MIR3074-201ENST00000384885 81 ntBASIC4.36□□□□□ -1.71
DDX58O95786 ARF4P3-201ENST00000397387 509 ntBASIC4.36□□□□□ -1.71
DDX58O95786 RAC1P3-201ENST00000416129 580 ntBASIC4.36□□□□□ -1.71
DDX58O95786 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.36□□□□□ -1.71
DDX58O95786 AC084290.1-201ENST00000434995 374 ntBASIC4.36□□□□□ -1.71
DDX58O95786 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.36□□□□□ -1.71
DDX58O95786 CR769776.1-201ENST00000441254 787 ntBASIC4.36□□□□□ -1.71
DDX58O95786 RPL39P6-201ENST00000448289 150 ntBASIC4.36□□□□□ -1.71
DDX58O95786 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.36□□□□□ -1.71
DDX58O95786 snoU13.3-201ENST00000459441 104 ntBASIC4.36□□□□□ -1.71
DDX58O95786 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.36□□□□□ -1.71
DDX58O95786 AC078918.1-201ENST00000498515 228 ntBASIC4.36□□□□□ -1.71
DDX58O95786 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.36□□□□□ -1.71
DDX58O95786 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.36□□□□□ -1.71
DDX58O95786 AC114322.1-201ENST00000506771 926 ntBASIC4.36□□□□□ -1.71
DDX58O95786 AC005921.1-201ENST00000510589 286 ntBASIC4.36□□□□□ -1.71
DDX58O95786 RN7SKP31-201ENST00000516354 278 ntBASIC4.36□□□□□ -1.71
DDX58O95786 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
DDX58O95786 AP004371.1-201ENST00000525240 214 ntBASIC4.36□□□□□ -1.71
DDX58O95786 SLC2A13P1-201ENST00000531560 322 ntBASIC4.36□□□□□ -1.71
DDX58O95786 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.36□□□□□ -1.71
DDX58O95786 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.36□□□□□ -1.71
DDX58O95786 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.36□□□□□ -1.71
DDX58O95786 AC125611.1-201ENST00000549563 229 ntBASIC4.36□□□□□ -1.71
DDX58O95786 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.36□□□□□ -1.71
DDX58O95786 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.36□□□□□ -1.71
DDX58O95786 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.36□□□□□ -1.71
DDX58O95786 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.36□□□□□ -1.71
DDX58O95786 AL031985.2-201ENST00000600955 480 ntBASIC4.36□□□□□ -1.71
DDX58O95786 AC025946.2-201ENST00000603398 234 ntBASIC4.36□□□□□ -1.71
DDX58O95786 AC109809.1-201ENST00000619665 545 ntBASIC4.36□□□□□ -1.71
DDX58O95786 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
DDX58O95786 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms