Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 FAM92A1P2-202ENST00000504766 877 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 AC091133.4-201ENST00000511142 308 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.76□□□□□ -1.65
CDKL5O76039 PAICSP4-201ENST00000517543 1253 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.76□□□□□ -1.65
CDKL5O76039 COX6B1P6-201ENST00000522347 255 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.76□□□□□ -1.65
CDKL5O76039 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.76□□□□□ -1.65
CDKL5O76039 MIR3138-201ENST00000585238 82 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.76□□□□□ -1.65
CDKL5O76039 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.76□□□□□ -1.65
CDKL5O76039 AP000860.1-201ENST00000605250 559 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 AC131902.3-201ENST00000611767 581 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 AC025253.1-201ENST00000613623 543 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.76□□□□□ -1.65
CDKL5O76039 AC092794.2-201ENST00000620933 563 ntBASIC4.76□□□□□ -1.65
CDKL5O76039 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.76□□□□□ -1.65
CDKL5O76039 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.76□□□□□ -1.65
CDKL5O76039 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDKL5O76039 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDKL5O76039 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDKL5O76039 GDI2P1-201ENST00000429312 1336 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDKL5O76039 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.75□□□□□ -1.65
CDKL5O76039 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDKL5O76039 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.75□□□□□ -1.65
CDKL5O76039 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CDKL5O76039 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.75□□□□□ -1.65
CDKL5O76039 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CDKL5O76039 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CDKL5O76039 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
CDKL5O76039 SNORA51.12-201ENST00000384448 134 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 RNU6-1151P-201ENST00000384684 107 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
CDKL5O76039 SNORA3C-201ENST00000408792 125 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 USP9YP6-201ENST00000413550 854 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 JKAMPP1-201ENST00000413804 919 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.75□□□□□ -1.65
CDKL5O76039 USP9YP13-201ENST00000417797 480 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 NIPA2P1-201ENST00000426223 976 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 AL356583.2-201ENST00000426536 280 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDKL5O76039 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.75□□□□□ -1.65
CDKL5O76039 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.75□□□□□ -1.65
CDKL5O76039 AL353748.1-201ENST00000440753 474 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 AL662791.1-201ENST00000441992 928 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 Z99127.3-201ENST00000448158 395 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.75□□□□□ -1.65
CDKL5O76039 NDUFA5P7-201ENST00000452914 242 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 IFNWP4-201ENST00000453148 294 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 USP9YP34-201ENST00000453983 808 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 AC146507.1-201ENST00000468335 354 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 RPL7P24-201ENST00000493052 752 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 FCF1P3-201ENST00000496394 590 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.75□□□□□ -1.65
CDKL5O76039 AF131216.2-201ENST00000512316 564 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 RNU6-583P-201ENST00000516012 92 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 RNU6-528P-201ENST00000516926 100 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 AC008562.1-201ENST00000521763 330 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 AF279873.1-201ENST00000523393 313 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.75□□□□□ -1.65
CDKL5O76039 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.75□□□□□ -1.65
CDKL5O76039 OR6C73P-201ENST00000546432 358 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 ADI1P3-201ENST00000549509 470 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 AC006960.3-201ENST00000561845 705 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 AC141257.3-201ENST00000572906 215 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 AC025627.2-201ENST00000576220 160 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.75□□□□□ -1.65
CDKL5O76039 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDKL5O76039 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.75□□□□□ -1.65
CDKL5O76039 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.75□□□□□ -1.65
CDKL5O76039 ARF4P1-201ENST00000605447 541 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 AC103710.4-201ENST00000609301 899 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 AL359535.1-201ENST00000612100 1087 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 AL445567.2-201ENST00000618935 498 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.75□□□□□ -1.65
CDKL5O76039 AC099654.14-201ENST00000638599 341 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 FAM157B-203ENST00000639350 358 ntBASIC4.75□□□□□ -1.65
CDKL5O76039 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDKL5O76039 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.75□□□□□ -1.65
CDKL5O76039 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.75□□□□□ -1.65
CDKL5O76039 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDKL5O76039 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDKL5O76039 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDKL5O76039 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.74□□□□□ -1.65
CDKL5O76039 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.74□□□□□ -1.65
CDKL5O76039 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.74□□□□□ -1.65
CDKL5O76039 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
CDKL5O76039 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDKL5O76039 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDKL5O76039 RNU6-462P-201ENST00000362659 105 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 RN7SKP44-201ENST00000363602 316 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 RNU6-115P-201ENST00000364310 107 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDKL5O76039 MIR1251-201ENST00000408552 70 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 Y_RNA.625-201ENST00000411256 107 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 FAR2P2-201ENST00000413041 594 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.74□□□□□ -1.65
CDKL5O76039 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.74□□□□□ -1.65
CDKL5O76039 AL391219.1-201ENST00000422570 483 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms