Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 RNU6-328P-201ENST00000390887 106 ntBASIC3.53□□□□□ -1.84
NPHP4O75161 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPHP4O75161 MTCO3P21-201ENST00000430791 643 ntBASIC3.53□□□□□ -1.84
NPHP4O75161 AC009969.1-201ENST00000438726 172 ntBASIC3.53□□□□□ -1.84
NPHP4O75161 NDUFS5P3-201ENST00000450668 321 ntBASIC3.53□□□□□ -1.84
NPHP4O75161 CACYBPP2-201ENST00000453625 678 ntBASIC3.53□□□□□ -1.84
NPHP4O75161 RNU6-1218P-201ENST00000458990 108 ntBASIC3.53□□□□□ -1.84
NPHP4O75161 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
NPHP4O75161 AC068587.2-201ENST00000478386 781 ntBASIC3.53□□□□□ -1.84
NPHP4O75161 AC108860.1-201ENST00000484521 383 ntBASIC3.53□□□□□ -1.84
NPHP4O75161 AC010627.1-201ENST00000503819 1294 ntBASIC3.53□□□□□ -1.84
NPHP4O75161 OR5AK3P-201ENST00000527486 1297 ntBASIC3.53□□□□□ -1.84
NPHP4O75161 OR8L1P-201ENST00000534005 955 ntBASIC3.53□□□□□ -1.84
NPHP4O75161 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.53□□□□□ -1.84
NPHP4O75161 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.53□□□□□ -1.84
NPHP4O75161 RPL23AP61-201ENST00000623642 466 ntBASIC3.53□□□□□ -1.84
NPHP4O75161 AC110994.2-201ENST00000635481 492 ntBASIC3.53□□□□□ -1.84
NPHP4O75161 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.53□□□□□ -1.84
NPHP4O75161 AC114546.3-201ENST00000623582 1734 ntBASIC3.53□□□□□ -1.84
NPHP4O75161 AC002543.1-201ENST00000299783 1954 ntBASIC3.53□□□□□ -1.84
NPHP4O75161 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NPHP4O75161 RNU6-1159P-201ENST00000362933 107 ntBASIC3.53□□□□□ -1.85
NPHP4O75161 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
NPHP4O75161 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.53□□□□□ -1.85
NPHP4O75161 RNU6-564P-201ENST00000410983 104 ntBASIC3.53□□□□□ -1.85
NPHP4O75161 AC073464.3-201ENST00000422564 712 ntBASIC3.53□□□□□ -1.85
NPHP4O75161 RPL21P18-201ENST00000469899 480 ntBASIC3.53□□□□□ -1.85
NPHP4O75161 RPL23AP11-201ENST00000475260 469 ntBASIC3.53□□□□□ -1.85
NPHP4O75161 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.53□□□□□ -1.85
NPHP4O75161 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.53□□□□□ -1.85
NPHP4O75161 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.53□□□□□ -1.85
NPHP4O75161 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.53□□□□□ -1.85
NPHP4O75161 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.53□□□□□ -1.85
NPHP4O75161 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.53□□□□□ -1.85
NPHP4O75161 AP001004.1-201ENST00000582468 324 ntBASIC3.53□□□□□ -1.85
NPHP4O75161 AC005021.1-201ENST00000608730 355 ntBASIC3.53□□□□□ -1.85
NPHP4O75161 AL020991.1-201ENST00000612314 373 ntBASIC3.53□□□□□ -1.85
NPHP4O75161 MTND5P19-201ENST00000424872 1794 ntBASIC3.52□□□□□ -1.85
NPHP4O75161 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.52□□□□□ -1.85
NPHP4O75161 MIR320B1-201ENST00000390209 79 ntBASIC3.52□□□□□ -1.85
NPHP4O75161 AC080125.1-201ENST00000414888 684 ntBASIC3.52□□□□□ -1.85
NPHP4O75161 AP004217.1-201ENST00000480579 346 ntBASIC3.52□□□□□ -1.85
NPHP4O75161 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.52□□□□□ -1.85
NPHP4O75161 SNORA9.3-201ENST00000516383 129 ntBASIC3.52□□□□□ -1.85
NPHP4O75161 RNU6-1308P-201ENST00000516817 103 ntBASIC3.52□□□□□ -1.85
NPHP4O75161 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.52□□□□□ -1.85
NPHP4O75161 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.52□□□□□ -1.85
NPHP4O75161 uc_338.9-201ENST00000617424 182 ntBASIC3.52□□□□□ -1.85
NPHP4O75161 GTF2H2B-203ENST00000508065 1432 ntBASIC3.51□□□□□ -1.85
NPHP4O75161 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NPHP4O75161 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NPHP4O75161 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NPHP4O75161 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NPHP4O75161 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NPHP4O75161 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NPHP4O75161 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NPHP4O75161 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NPHP4O75161 AL451074.5-201ENST00000415894 435 ntBASIC3.51□□□□□ -1.85
NPHP4O75161 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.51□□□□□ -1.85
NPHP4O75161 ARF4P2-201ENST00000430209 526 ntBASIC3.51□□□□□ -1.85
NPHP4O75161 NDUFA5P10-201ENST00000432147 357 ntBASIC3.51□□□□□ -1.85
NPHP4O75161 AL592437.1-201ENST00000443781 492 ntBASIC3.51□□□□□ -1.85
NPHP4O75161 RPL23AP45-201ENST00000476406 468 ntBASIC3.51□□□□□ -1.85
NPHP4O75161 AP000926.1-201ENST00000479573 241 ntBASIC3.51□□□□□ -1.85
NPHP4O75161 RPL23AP70-201ENST00000483361 460 ntBASIC3.51□□□□□ -1.85
NPHP4O75161 AC021087.2-201ENST00000504656 1203 ntBASIC3.51□□□□□ -1.85
NPHP4O75161 AC021146.7-201ENST00000509604 775 ntBASIC3.51□□□□□ -1.85
NPHP4O75161 AC116337.1-201ENST00000509680 687 ntBASIC3.51□□□□□ -1.85
NPHP4O75161 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.51□□□□□ -1.85
NPHP4O75161 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NPHP4O75161 EIF1AXP2-201ENST00000555940 413 ntBASIC3.51□□□□□ -1.85
NPHP4O75161 RPL23AP84-201ENST00000571193 464 ntBASIC3.51□□□□□ -1.85
NPHP4O75161 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.51□□□□□ -1.85
NPHP4O75161 AC006254.3-201ENST00000603353 884 ntBASIC3.51□□□□□ -1.85
NPHP4O75161 AP000942.3-201ENST00000603702 160 ntBASIC3.51□□□□□ -1.85
NPHP4O75161 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
NPHP4O75161 AC138915.3-201ENST00000562908 1389 ntBASIC3.5□□□□□ -1.85
NPHP4O75161 SNORD6-201ENST00000365444 73 ntBASIC3.5□□□□□ -1.85
NPHP4O75161 MIR181B1-201ENST00000385240 110 ntBASIC3.5□□□□□ -1.85
NPHP4O75161 GSTA12P-201ENST00000402398 508 ntBASIC3.5□□□□□ -1.85
NPHP4O75161 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.5□□□□□ -1.85
NPHP4O75161 AC011037.1-201ENST00000483964 558 ntBASIC3.5□□□□□ -1.85
NPHP4O75161 RN7SL283P-201ENST00000489055 303 ntBASIC3.5□□□□□ -1.85
NPHP4O75161 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.5□□□□□ -1.85
NPHP4O75161 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.5□□□□□ -1.85
NPHP4O75161 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.5□□□□□ -1.85
NPHP4O75161 AC046143.2-201ENST00000609789 160 ntBASIC3.5□□□□□ -1.85
NPHP4O75161 Z99129.2-201ENST00000619967 314 ntBASIC3.5□□□□□ -1.85
NPHP4O75161 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.5□□□□□ -1.85
NPHP4O75161 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.5□□□□□ -1.85
NPHP4O75161 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.49□□□□□ -1.85
NPHP4O75161 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.49□□□□□ -1.85
NPHP4O75161 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.49□□□□□ -1.85
NPHP4O75161 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.49□□□□□ -1.85
NPHP4O75161 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
NPHP4O75161 RNU4-23P-201ENST00000362839 140 ntBASIC3.49□□□□□ -1.85
NPHP4O75161 MORF4L1P6-201ENST00000418771 268 ntBASIC3.49□□□□□ -1.85
NPHP4O75161 AL355994.1-201ENST00000424379 260 ntBASIC3.49□□□□□ -1.85
NPHP4O75161 RPL36AP51-201ENST00000487216 318 ntBASIC3.49□□□□□ -1.85
NPHP4O75161 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms