Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RPL38P4-201ENST00000502376 214 ntBASIC6.28□□□□□ -1.4
PTCD1O75127 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.28□□□□□ -1.4
PTCD1O75127 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.28□□□□□ -1.4
PTCD1O75127 AC112206.3-201ENST00000514578 389 ntBASIC6.28□□□□□ -1.4
PTCD1O75127 AC068993.1-201ENST00000546724 589 ntBASIC6.28□□□□□ -1.4
PTCD1O75127 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.28□□□□□ -1.4
PTCD1O75127 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC6.28□□□□□ -1.4
PTCD1O75127 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.28□□□□□ -1.4
PTCD1O75127 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.28□□□□□ -1.4
PTCD1O75127 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC6.28□□□□□ -1.4
PTCD1O75127 AC022726.1-201ENST00000587475 207 ntBASIC6.28□□□□□ -1.4
PTCD1O75127 UBE2L4-201ENST00000587688 464 ntBASIC6.28□□□□□ -1.4
PTCD1O75127 AC008782.1-201ENST00000603386 430 ntBASIC6.28□□□□□ -1.4
PTCD1O75127 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC6.28□□□□□ -1.4
PTCD1O75127 AL138960.1-201ENST00000613838 513 ntBASIC6.28□□□□□ -1.4
PTCD1O75127 AC074140.1-201ENST00000621617 208 ntBASIC6.28□□□□□ -1.4
PTCD1O75127 AC134503.1-201ENST00000633048 54 ntBASIC6.28□□□□□ -1.4
PTCD1O75127 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PTCD1O75127 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PTCD1O75127 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PTCD1O75127 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.27□□□□□ -1.4
PTCD1O75127 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCD1O75127 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
PTCD1O75127 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTCD1O75127 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCD1O75127 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCD1O75127 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTCD1O75127 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PTCD1O75127 U3.20-201ENST00000390909 217 ntBASIC6.27□□□□□ -1.41
PTCD1O75127 U3.32-201ENST00000408116 212 ntBASIC6.27□□□□□ -1.41
PTCD1O75127 MTND3P8-201ENST00000412909 339 ntBASIC6.27□□□□□ -1.41
PTCD1O75127 NAP1L1P2-201ENST00000414182 1089 ntBASIC6.27□□□□□ -1.41
PTCD1O75127 OR1AA1P-201ENST00000419597 916 ntBASIC6.27□□□□□ -1.41
PTCD1O75127 IFNA20P-201ENST00000436840 528 ntBASIC6.27□□□□□ -1.41
PTCD1O75127 AC016831.4-201ENST00000438302 307 ntBASIC6.27□□□□□ -1.41
PTCD1O75127 RPS5P7-201ENST00000456664 608 ntBASIC6.27□□□□□ -1.41
PTCD1O75127 MRPS17P3-201ENST00000465453 385 ntBASIC6.27□□□□□ -1.41
PTCD1O75127 AL163973.1-201ENST00000484753 577 ntBASIC6.27□□□□□ -1.41
PTCD1O75127 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.27□□□□□ -1.41
PTCD1O75127 RNU6-794P-201ENST00000517261 64 ntBASIC6.27□□□□□ -1.41
PTCD1O75127 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.27□□□□□ -1.41
PTCD1O75127 AC133555.2-201ENST00000550213 292 ntBASIC6.27□□□□□ -1.41
PTCD1O75127 AL049839.1-201ENST00000556151 657 ntBASIC6.27□□□□□ -1.41
PTCD1O75127 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.27□□□□□ -1.41
PTCD1O75127 AL590392.1-201ENST00000604960 446 ntBASIC6.27□□□□□ -1.41
PTCD1O75127 AC090948.1-201ENST00000607464 549 ntBASIC6.27□□□□□ -1.41
PTCD1O75127 AC010424.2-201ENST00000607594 443 ntBASIC6.27□□□□□ -1.41
PTCD1O75127 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCD1O75127 OR52H1-202ENST00000641796 1061 ntBASIC6.27□□□□□ -1.41
PTCD1O75127 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTCD1O75127 MTND4P35-201ENST00000604257 1375 ntBASIC6.27□□□□□ -1.41
PTCD1O75127 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.27□□□□□ -1.41
PTCD1O75127 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.27□□□□□ -1.41
PTCD1O75127 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTCD1O75127 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
PTCD1O75127 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCD1O75127 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PTCD1O75127 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PTCD1O75127 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.26□□□□□ -1.41
PTCD1O75127 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
PTCD1O75127 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PTCD1O75127 OR9K1P-202ENST00000641111 3217 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCD1O75127 AP001350.1-201ENST00000601906 1524 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
PTCD1O75127 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCD1O75127 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PTCD1O75127 OR5P1P-201ENST00000299512 925 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PTCD1O75127 RNA5SP258-201ENST00000362750 119 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.26□□□□□ -1.41
PTCD1O75127 RNU6-1105P-201ENST00000384774 107 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 SNORA48.4-201ENST00000391089 134 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC6.26□□□□□ -1.41
PTCD1O75127 RPL6P29-201ENST00000414863 865 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 DUTP6-201ENST00000425573 462 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 AL732292.1-201ENST00000426692 226 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 RSL24D1P6-201ENST00000426934 401 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 UBE2V1P13-201ENST00000436983 439 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 AC092013.1-201ENST00000438795 332 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 MTND6P18-201ENST00000439477 513 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 AC108734.1-201ENST00000439549 399 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.26□□□□□ -1.41
PTCD1O75127 DDX3P2-201ENST00000446138 111 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.26□□□□□ -1.41
PTCD1O75127 AL356010.1-201ENST00000456364 102 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 snoU13.7-201ENST00000459220 104 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 RPS17P2-201ENST00000461663 408 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC6.26□□□□□ -1.41
PTCD1O75127 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC6.26□□□□□ -1.41
PTCD1O75127 AC018552.3-201ENST00000567416 561 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 AC136624.4-201ENST00000573044 370 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.26□□□□□ -1.41
PTCD1O75127 AL669831.4-202ENST00000590817 238 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 AC005191.1-201ENST00000603950 358 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 AC011460.1-201ENST00000636268 1834 ntBASIC6.26□□□□□ -1.41
PTCD1O75127 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.26□□□□□ -1.41
PTCD1O75127 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCD1O75127 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
PTCD1O75127 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms