Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC004925.1-201ENST00000624256 2706 ntBASIC3.24□□□□□ -1.89
CHMP2AO43633 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.24□□□□□ -1.89
CHMP2AO43633 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHMP2AO43633 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.23□□□□□ -1.89
CHMP2AO43633 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHMP2AO43633 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHMP2AO43633 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHMP2AO43633 ENSAP3-201ENST00000312710 333 ntBASIC3.23□□□□□ -1.89
CHMP2AO43633 RNU6-252P-201ENST00000363232 107 ntBASIC3.23□□□□□ -1.89
CHMP2AO43633 SNORA80A-201ENST00000363922 136 ntBASIC3.23□□□□□ -1.89
CHMP2AO43633 DYNLT3P1-201ENST00000378574 347 ntBASIC3.23□□□□□ -1.89
CHMP2AO43633 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP2AO43633 AL591034.1-201ENST00000407447 340 ntBASIC3.23□□□□□ -1.89
CHMP2AO43633 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP2AO43633 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.23□□□□□ -1.89
CHMP2AO43633 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.23□□□□□ -1.89
CHMP2AO43633 AC114973.1-201ENST00000429057 632 ntBASIC3.23□□□□□ -1.89
CHMP2AO43633 B3GNT2P1-201ENST00000434960 952 ntBASIC3.23□□□□□ -1.89
CHMP2AO43633 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.23□□□□□ -1.89
CHMP2AO43633 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.23□□□□□ -1.89
CHMP2AO43633 RPS27P29-201ENST00000463110 252 ntBASIC3.23□□□□□ -1.89
CHMP2AO43633 HMGB1P25-201ENST00000468402 607 ntBASIC3.23□□□□□ -1.89
CHMP2AO43633 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.23□□□□□ -1.89
CHMP2AO43633 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.23□□□□□ -1.89
CHMP2AO43633 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.23□□□□□ -1.89
CHMP2AO43633 RNF138P1-201ENST00000502765 546 ntBASIC3.23□□□□□ -1.89
CHMP2AO43633 AC097462.2-201ENST00000504623 481 ntBASIC3.23□□□□□ -1.89
CHMP2AO43633 MTCO3P44-201ENST00000510977 541 ntBASIC3.23□□□□□ -1.89
CHMP2AO43633 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.23□□□□□ -1.89
CHMP2AO43633 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP2AO43633 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHMP2AO43633 AC107016.2-201ENST00000547968 190 ntBASIC3.23□□□□□ -1.89
CHMP2AO43633 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.23□□□□□ -1.89
CHMP2AO43633 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP2AO43633 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.23□□□□□ -1.89
CHMP2AO43633 XIAPP1-201ENST00000603162 600 ntBASIC3.23□□□□□ -1.89
CHMP2AO43633 MIR7106-201ENST00000612419 65 ntBASIC3.23□□□□□ -1.89
CHMP2AO43633 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP2AO43633 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CHMP2AO43633 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP2AO43633 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP2AO43633 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHMP2AO43633 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHMP2AO43633 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP2AO43633 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP2AO43633 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.23□□□□□ -1.89
CHMP2AO43633 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
CHMP2AO43633 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHMP2AO43633 RNU6-7-201ENST00000364784 107 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 RNU6-8-201ENST00000365467 107 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 SNORA51.12-201ENST00000384448 134 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CHMP2AO43633 RNU6-837P-201ENST00000391056 108 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 RPL21P3-201ENST00000395517 478 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 SSXP10-201ENST00000402595 565 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 RNA5SP56-201ENST00000410277 118 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.22□□□□□ -1.89
CHMP2AO43633 OFD1P18Y-201ENST00000420889 959 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.22□□□□□ -1.89
CHMP2AO43633 AC010881.1-201ENST00000433830 235 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 AC093156.1-201ENST00000440382 670 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 AC146507.2-201ENST00000460608 476 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 AC010301.1-201ENST00000473936 355 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.22□□□□□ -1.89
CHMP2AO43633 TXNP6-201ENST00000510190 310 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.22□□□□□ -1.89
CHMP2AO43633 AC026801.2-201ENST00000515352 425 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 RNU1-61P-201ENST00000516107 151 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 RNU1-103P-201ENST00000516502 125 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC3.22□□□□□ -1.89
CHMP2AO43633 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.22□□□□□ -1.89
CHMP2AO43633 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.22□□□□□ -1.89
CHMP2AO43633 AL669831.4-202ENST00000590817 238 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 AC024153.1-201ENST00000603103 365 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 AC025588.3-201ENST00000604182 274 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 AC135178.6-201ENST00000605314 398 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 AL451074.6-201ENST00000608512 729 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 AL035425.3-201ENST00000564206 4996 ntBASIC3.22□□□□□ -1.89
CHMP2AO43633 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.22□□□□□ -1.89
CHMP2AO43633 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CHMP2AO43633 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
CHMP2AO43633 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CHMP2AO43633 ZNF734P-201ENST00000419494 1534 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHMP2AO43633 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CHMP2AO43633 SNORD115-48-201ENST00000364764 76 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.21□□□□□ -1.9
CHMP2AO43633 RNU6-851P-201ENST00000384565 107 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHMP2AO43633 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.21□□□□□ -1.9
CHMP2AO43633 RAD23BP2-201ENST00000416003 1207 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.21□□□□□ -1.9
CHMP2AO43633 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 OR2AS1P-201ENST00000427827 319 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 RPL21P40-201ENST00000428586 483 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 ZNF965P-201ENST00000432501 817 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 AC000041.1-201ENST00000439655 175 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 RPS26P30-201ENST00000443431 335 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 RPS26P56-201ENST00000444468 240 ntBASIC3.21□□□□□ -1.9
CHMP2AO43633 MTND1P33-201ENST00000446251 917 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms