Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
DFFAO00273 AC093422.3-201ENST00000428506 305 ntBASIC2.96□□□□□ -1.94
DFFAO00273 RPS20P5-201ENST00000434808 360 ntBASIC2.96□□□□□ -1.94
DFFAO00273 AC244505.4-201ENST00000434905 287 ntBASIC2.96□□□□□ -1.94
DFFAO00273 SSXP5-201ENST00000443473 287 ntBASIC2.96□□□□□ -1.94
DFFAO00273 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.96□□□□□ -1.94
DFFAO00273 RPS29P26-201ENST00000477483 171 ntBASIC2.96□□□□□ -1.94
DFFAO00273 AC108860.1-201ENST00000484521 383 ntBASIC2.96□□□□□ -1.94
DFFAO00273 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.96□□□□□ -1.94
DFFAO00273 AC083906.5-201ENST00000503722 328 ntBASIC2.96□□□□□ -1.94
DFFAO00273 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.96□□□□□ -1.94
DFFAO00273 AC104108.1-201ENST00000509930 412 ntBASIC2.96□□□□□ -1.94
DFFAO00273 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.96□□□□□ -1.94
DFFAO00273 RNA5SP385-201ENST00000515947 110 ntBASIC2.96□□□□□ -1.94
DFFAO00273 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.96□□□□□ -1.94
DFFAO00273 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.96□□□□□ -1.94
DFFAO00273 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.96□□□□□ -1.94
DFFAO00273 AC034105.3-201ENST00000565294 442 ntBASIC2.96□□□□□ -1.94
DFFAO00273 AC012254.4-201ENST00000588843 273 ntBASIC2.96□□□□□ -1.94
DFFAO00273 AL109653.1-201ENST00000603091 248 ntBASIC2.96□□□□□ -1.94
DFFAO00273 AC004832.5-201ENST00000608677 401 ntBASIC2.96□□□□□ -1.94
DFFAO00273 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
DFFAO00273 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.96□□□□□ -1.94
DFFAO00273 AC073569.3-201ENST00000619055 682 ntBASIC2.96□□□□□ -1.94
DFFAO00273 AC110774.1-201ENST00000623567 2018 ntBASIC2.96□□□□□ -1.94
DFFAO00273 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
DFFAO00273 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.96□□□□□ -1.94
DFFAO00273 AC108206.1-201ENST00000570186 4159 ntBASIC2.96□□□□□ -1.94
DFFAO00273 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
DFFAO00273 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
DFFAO00273 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
DFFAO00273 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.95□□□□□ -1.94
DFFAO00273 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.95□□□□□ -1.94
DFFAO00273 RNU1-35P-201ENST00000362782 153 ntBASIC2.95□□□□□ -1.94
DFFAO00273 SSXP10-201ENST00000402595 565 ntBASIC2.95□□□□□ -1.94
DFFAO00273 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.95□□□□□ -1.94
DFFAO00273 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.95□□□□□ -1.94
DFFAO00273 AL158825.1-201ENST00000414735 521 ntBASIC2.95□□□□□ -1.94
DFFAO00273 AC008280.1-201ENST00000418851 412 ntBASIC2.95□□□□□ -1.94
DFFAO00273 OFD1P18Y-201ENST00000420889 959 ntBASIC2.95□□□□□ -1.94
DFFAO00273 AC010881.1-201ENST00000433830 235 ntBASIC2.95□□□□□ -1.94
DFFAO00273 RPL23AP83-201ENST00000434984 473 ntBASIC2.95□□□□□ -1.94
DFFAO00273 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.95□□□□□ -1.94
DFFAO00273 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.95□□□□□ -1.94
DFFAO00273 HSPE1P28-201ENST00000443139 211 ntBASIC2.95□□□□□ -1.94
DFFAO00273 S100A11P2-201ENST00000467589 312 ntBASIC2.95□□□□□ -1.94
DFFAO00273 RPL21P18-201ENST00000469899 480 ntBASIC2.95□□□□□ -1.94
DFFAO00273 AC108729.2-201ENST00000476543 840 ntBASIC2.95□□□□□ -1.94
DFFAO00273 SETP6-201ENST00000479329 568 ntBASIC2.95□□□□□ -1.94
DFFAO00273 MTCO3P35-201ENST00000485582 781 ntBASIC2.95□□□□□ -1.94
DFFAO00273 AC006483.1-201ENST00000487308 313 ntBASIC2.95□□□□□ -1.94
DFFAO00273 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.95□□□□□ -1.94
DFFAO00273 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
DFFAO00273 AC111000.2-201ENST00000507775 550 ntBASIC2.95□□□□□ -1.94
DFFAO00273 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.95□□□□□ -1.94
DFFAO00273 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.95□□□□□ -1.94
DFFAO00273 MIR4506-201ENST00000584693 77 ntBASIC2.95□□□□□ -1.94
DFFAO00273 AC083760.1-201ENST00000589621 670 ntBASIC2.95□□□□□ -1.94
DFFAO00273 AL133393.1-201ENST00000603277 287 ntBASIC2.95□□□□□ -1.94
DFFAO00273 AL590282.1-201ENST00000610379 1136 ntBASIC2.95□□□□□ -1.94
DFFAO00273 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.95□□□□□ -1.94
DFFAO00273 AL020991.1-201ENST00000612314 373 ntBASIC2.95□□□□□ -1.94
DFFAO00273 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.95□□□□□ -1.94
DFFAO00273 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
DFFAO00273 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
DFFAO00273 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
DFFAO00273 AC004925.1-201ENST00000624256 2706 ntBASIC2.94□□□□□ -1.94
DFFAO00273 ZNF734P-201ENST00000419494 1534 ntBASIC2.94□□□□□ -1.94
DFFAO00273 ZNF807-201ENST00000328088 1707 ntBASIC2.94□□□□□ -1.94
DFFAO00273 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
DFFAO00273 RNU6-263P-201ENST00000363811 107 ntBASIC2.94□□□□□ -1.94
DFFAO00273 RNU6-1181P-201ENST00000384191 106 ntBASIC2.94□□□□□ -1.94
DFFAO00273 RNU6-1226P-201ENST00000384317 107 ntBASIC2.94□□□□□ -1.94
DFFAO00273 SNORA44-201ENST00000384584 132 ntBASIC2.94□□□□□ -1.94
DFFAO00273 RNU6-837P-201ENST00000391056 108 ntBASIC2.94□□□□□ -1.94
DFFAO00273 RPL7P44-201ENST00000424827 742 ntBASIC2.94□□□□□ -1.94
DFFAO00273 PTP4A1P3-201ENST00000433661 420 ntBASIC2.94□□□□□ -1.94
DFFAO00273 ZFAND6P1-201ENST00000434138 605 ntBASIC2.94□□□□□ -1.94
DFFAO00273 AL691517.1-201ENST00000440833 1235 ntBASIC2.94□□□□□ -1.94
DFFAO00273 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.94□□□□□ -1.94
DFFAO00273 RPS26P30-201ENST00000443431 335 ntBASIC2.94□□□□□ -1.94
DFFAO00273 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
DFFAO00273 NIPA2P5-201ENST00000452282 464 ntBASIC2.94□□□□□ -1.94
DFFAO00273 NPM1P13-201ENST00000452663 865 ntBASIC2.94□□□□□ -1.94
DFFAO00273 RPS24P6-201ENST00000452670 400 ntBASIC2.94□□□□□ -1.94
DFFAO00273 BX248409.1-201ENST00000455497 255 ntBASIC2.94□□□□□ -1.94
DFFAO00273 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.94□□□□□ -1.94
DFFAO00273 AC118282.1-201ENST00000506408 765 ntBASIC2.94□□□□□ -1.94
DFFAO00273 AC119751.1-201ENST00000513357 765 ntBASIC2.94□□□□□ -1.94
DFFAO00273 AC104057.1-201ENST00000515547 497 ntBASIC2.94□□□□□ -1.94
DFFAO00273 SNORA74D-201ENST00000516404 141 ntBASIC2.94□□□□□ -1.94
DFFAO00273 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.94□□□□□ -1.94
DFFAO00273 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.94□□□□□ -1.94
DFFAO00273 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.94□□□□□ -1.94
DFFAO00273 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.94□□□□□ -1.94
DFFAO00273 AC092470.1-201ENST00000546187 132 ntBASIC2.94□□□□□ -1.94
DFFAO00273 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.94□□□□□ -1.94
DFFAO00273 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.94□□□□□ -1.94
DFFAO00273 AC055876.1-202ENST00000567053 138 ntBASIC2.94□□□□□ -1.94
DFFAO00273 MTCO3P24-201ENST00000572729 782 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms