Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC010198.2-201ENST00000550612 259 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.71□□□□□ -1.82
CCDC188H7C350 HSPE1P3-201ENST00000559254 309 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 AGGF1P5-201ENST00000567900 919 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 MIR5187-201ENST00000583479 76 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 AC069304.2-201ENST00000605154 435 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 AL591034.3-201ENST00000605511 685 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 AC007349.4-201ENST00000608114 532 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 AC097478.2-201ENST00000610572 514 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 AC005962.2-201ENST00000611427 652 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 MIR6716-201ENST00000613413 80 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 AP001002.2-201ENST00000625137 386 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC188H7C350 AL390862.1-201ENST00000635467 1469 ntBASIC3.71□□□□□ -1.82
CCDC188H7C350 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC188H7C350 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC188H7C350 AL356473.1-201ENST00000406203 1408 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CCDC188H7C350 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CCDC188H7C350 MFSD8-233ENST00000641482 4860 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC188H7C350 SNORD51-201ENST00000384320 80 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC188H7C350 MIR1284-201ENST00000408337 120 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC188H7C350 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC188H7C350 RPS7P13-201ENST00000413955 498 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 AC009237.5-201ENST00000414271 501 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 AL592310.1-201ENST00000414330 671 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 AC245054.1-201ENST00000420944 258 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC188H7C350 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC188H7C350 AC017083.1-201ENST00000428093 483 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 AC004975.1-201ENST00000428733 208 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC188H7C350 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC188H7C350 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC188H7C350 NECAP1P2-201ENST00000455668 727 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 RPS7P7-201ENST00000463499 571 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 RPL7L1P8-201ENST00000469911 741 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC188H7C350 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC188H7C350 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC188H7C350 AC091951.3-201ENST00000504093 246 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC188H7C350 MLLT10P2-201ENST00000506434 249 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC188H7C350 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC188H7C350 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC188H7C350 AC010587.2-201ENST00000511727 448 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC188H7C350 SNORA70.14-201ENST00000516205 110 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC188H7C350 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.7□□□□□ -1.82
CCDC188H7C350 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC188H7C350 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
CCDC188H7C350 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC188H7C350 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC188H7C350 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC188H7C350 AC005344.1-201ENST00000613391 459 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 AC004009.2-201ENST00000623016 728 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 FP236240.3-201ENST00000623061 327 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 AP003355.3-201ENST00000623465 114 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 GABPAP-201ENST00000419271 1356 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 AL049780.3-201ENST00000624612 1583 ntBASIC3.7□□□□□ -1.82
CCDC188H7C350 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC188H7C350 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC188H7C350 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC188H7C350 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC188H7C350 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CCDC188H7C350 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC188H7C350 AL079343.1-201ENST00000572358 1771 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC188H7C350 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC188H7C350 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC188H7C350 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC188H7C350 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC188H7C350 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CCDC188H7C350 RNU6-50P-201ENST00000362356 103 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 RNA5SP479-201ENST00000364858 117 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 AL031679.1-201ENST00000400616 525 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 MIR1193-201ENST00000408109 78 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC188H7C350 RN7SKP27-201ENST00000410684 333 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 AL137014.1-201ENST00000420490 1226 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 RPS15AP6-201ENST00000420703 385 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC188H7C350 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC188H7C350 OR8F1P-201ENST00000425243 930 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC188H7C350 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC188H7C350 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.69□□□□□ -1.82
CCDC188H7C350 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.69□□□□□ -1.82
CCDC188H7C350 MUPP-201ENST00000438111 566 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 MTND3P1-201ENST00000441336 220 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 TXNP1-201ENST00000441872 371 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC188H7C350 AC239367.2-201ENST00000447309 705 ntBASIC3.69□□□□□ -1.82
CCDC188H7C350 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms