Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RNU6-799P-201ENST00000363567 107 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC2.54□□□□□ -2
SMKR1H3BMG3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC2.54□□□□□ -2
SMKR1H3BMG3 RPL7P60-201ENST00000397636 735 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 RNU2-42P-201ENST00000410697 113 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 AC096533.1-201ENST00000411645 353 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 AC126124.2-201ENST00000413542 321 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 AL356968.1-201ENST00000416622 474 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 MTATP6P27-201ENST00000416987 621 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.54□□□□□ -2
SMKR1H3BMG3 AC007435.1-201ENST00000421086 415 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.54□□□□□ -2
SMKR1H3BMG3 BX890604.2-201ENST00000427883 474 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.54□□□□□ -2
SMKR1H3BMG3 NDUFB4P6-201ENST00000436819 366 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC2.54□□□□□ -2
SMKR1H3BMG3 AC093392.2-201ENST00000450682 337 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 MTCO3P11-201ENST00000455103 774 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.54□□□□□ -2
SMKR1H3BMG3 AC091179.1-201ENST00000461606 579 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.54□□□□□ -2
SMKR1H3BMG3 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.54□□□□□ -2
SMKR1H3BMG3 AC023424.2-201ENST00000493479 777 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.54□□□□□ -2
SMKR1H3BMG3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.54□□□□□ -2
SMKR1H3BMG3 MTCYBP16-201ENST00000509187 1129 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 TXNP6-201ENST00000510190 310 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 AL359273.1-201ENST00000510918 627 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.54□□□□□ -2
SMKR1H3BMG3 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC2.54□□□□□ -2
SMKR1H3BMG3 SNORA31.9-201ENST00000516429 84 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 RNU6-579P-201ENST00000516879 102 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 AC107934.2-201ENST00000518653 310 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.54□□□□□ -2
SMKR1H3BMG3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.54□□□□□ -2
SMKR1H3BMG3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
SMKR1H3BMG3 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.54□□□□□ -2
SMKR1H3BMG3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.54□□□□□ -2
SMKR1H3BMG3 AC084824.1-201ENST00000550917 1005 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC2.54□□□□□ -2
SMKR1H3BMG3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.54□□□□□ -2
SMKR1H3BMG3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.54□□□□□ -2
SMKR1H3BMG3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.54□□□□□ -2
SMKR1H3BMG3 MIR3921-201ENST00000577308 85 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.54□□□□□ -2
SMKR1H3BMG3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.54□□□□□ -2
SMKR1H3BMG3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.54□□□□□ -2
SMKR1H3BMG3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.54□□□□□ -2
SMKR1H3BMG3 GLUD1P4-201ENST00000590914 418 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 DUXAP11-201ENST00000603858 526 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 TEX41-238ENST00000604253 709 ntTSL 5 BASIC2.54□□□□□ -2
SMKR1H3BMG3 AC069545.1-201ENST00000605671 358 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 MIR6867-201ENST00000610636 67 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 Mico1.1-201ENST00000611698 204 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 AL445567.2-201ENST00000618935 498 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.54□□□□□ -2
SMKR1H3BMG3 AC011330.2-201ENST00000621680 635 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 CRYM-AS1-204ENST00000637983 556 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC2.54□□□□□ -2
SMKR1H3BMG3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.54□□□□□ -2
SMKR1H3BMG3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SMKR1H3BMG3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC2.54□□□□□ -2
SMKR1H3BMG3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.54□□□□□ -2
SMKR1H3BMG3 GABRG2-229ENST00000641017 3628 ntBASIC2.54□□□□□ -2
SMKR1H3BMG3 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.54□□□□□ -2
SMKR1H3BMG3 AC007823.1-201ENST00000569932 1566 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
SMKR1H3BMG3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.53□□□□□ -2
SMKR1H3BMG3 AC008568.2-201ENST00000623862 2313 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.53□□□□□ -2
SMKR1H3BMG3 CDR1-202ENST00000625883 1485 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.53□□□□□ -2
SMKR1H3BMG3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
SMKR1H3BMG3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SMKR1H3BMG3 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.53□□□□□ -2
SMKR1H3BMG3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
SMKR1H3BMG3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SMKR1H3BMG3 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.53□□□□□ -2
SMKR1H3BMG3 MIR148B-201ENST00000362252 99 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 RNU1-64P-201ENST00000365443 163 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 Y_RNA.578-201ENST00000390903 88 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 RNA5SP293-201ENST00000410527 113 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.53□□□□□ -2
SMKR1H3BMG3 AL592310.1-201ENST00000414330 671 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.53□□□□□ -2
SMKR1H3BMG3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.53□□□□□ -2
SMKR1H3BMG3 AP000949.1-201ENST00000438328 629 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC2.53□□□□□ -2
SMKR1H3BMG3 AL592447.1-201ENST00000447592 540 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC2.53□□□□□ -2
SMKR1H3BMG3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC2.53□□□□□ -2
SMKR1H3BMG3 AC034236.1-201ENST00000469891 373 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 SETP11-201ENST00000473027 690 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
SMKR1H3BMG3 RN7SL323P-201ENST00000494712 295 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 TMEM251P1-201ENST00000503717 318 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.53□□□□□ -2
SMKR1H3BMG3 AC069306.1-201ENST00000507006 843 ntBASIC2.53□□□□□ -2
SMKR1H3BMG3 AC113420.1-201ENST00000507903 571 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms