Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DEFB131D-201ENST00000526803 184 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 PDCL2P2-201ENST00000533651 189 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AP004242.1-201ENST00000533701 349 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AC023050.2-201ENST00000544968 387 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AL121603.1-201ENST00000553815 142 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 DUXAP1-201ENST00000556632 463 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 MIR3944-201ENST00000581277 108 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 VN1R78P-201ENST00000597393 564 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 VN1R82P-201ENST00000601481 356 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AC093424.1-201ENST00000604999 338 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AC128687.1-201ENST00000605304 619 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AC080013.4-201ENST00000607624 649 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AL359715.5-201ENST00000623431 443 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 OTUD4P1-201ENST00000237841 3067 ntBASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPIPA3F8WFD2 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 RNA5SP189-201ENST00000364920 115 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 SNORA5A-201ENST00000384111 134 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 MIR7-3-201ENST00000384898 110 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AL031679.1-201ENST00000400616 525 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 RNU6-712P-201ENST00000410558 100 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AL035423.1-201ENST00000420331 213 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AL590233.1-201ENST00000430017 456 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 MTND1P32-201ENST00000433043 938 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 Z74696.2-201ENST00000436514 498 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 RPS17P13-201ENST00000448974 407 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 CEACAMP4-201ENST00000457676 421 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 FAM172BP-201ENST00000487497 1089 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 RNA5SP164-201ENST00000516533 110 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 CYCSP2-201ENST00000558168 301 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AC087465.1-201ENST00000560574 245 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AC055876.5-201ENST00000605667 259 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AC011816.2-201ENST00000607089 556 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AC087683.2-201ENST00000611384 326 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AC024560.2-201ENST00000507981 1497 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 MAPK10-372ENST00000641954 3413 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 AC244517.1-201ENST00000606030 2086 ntBASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPIPA3F8WFD2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 RNU6-600P-201ENST00000362524 99 ntBASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 RNU6-328P-201ENST00000390887 106 ntBASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 RNA5SP39-201ENST00000411245 120 ntBASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 RAD23BP2-201ENST00000416003 1207 ntBASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 MTATP6P27-201ENST00000416987 621 ntBASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 AC091286.1-201ENST00000431233 461 ntBASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.44□□□□□ -1.86
NPIPA3F8WFD2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms