Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 RNU1-101P-201ENST00000391171 127 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL138827.1-201ENST00000402666 306 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL355379.1-201ENST00000405542 640 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL592148.1-201ENST00000413568 445 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 RPL31P2-201ENST00000413849 377 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 EI24P1-201ENST00000416584 867 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC244098.2-201ENST00000422068 99 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC019097.1-201ENST00000424783 735 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC109583.1-201ENST00000432156 268 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL606490.7-201ENST00000433136 191 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 HMGB1P12-201ENST00000438594 598 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 MTCO3P17-201ENST00000443775 513 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AP001025.2-201ENST00000490908 477 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC004486.1-201ENST00000546846 233 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL049874.4-201ENST00000557593 255 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL390838.2-201ENST00000602394 274 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC096947.1-201ENST00000603233 470 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 MTND4P34-201ENST00000572715 1371 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC009501.3-201ENST00000605001 1352 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL136164.4-201ENST00000625013 2135 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC011978.2-201ENST00000569835 2054 ntBASIC2.18□□□□□ -2.06
TCRBV4S1A1TA0A5B7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 SNORD21-201ENST00000383953 95 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 NUP35P2-201ENST00000416748 943 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL096701.2-201ENST00000416920 238 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC234782.4-201ENST00000417646 1048 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 RPS15AP40-201ENST00000419621 391 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 NUP35P1-201ENST00000422734 947 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 ARL5AP4-201ENST00000430731 512 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 RPL21P112-201ENST00000434403 463 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC023512.1-201ENST00000444513 499 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 RPL23AP20-201ENST00000447965 421 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 BX276092.4-201ENST00000452056 248 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 RPL31P50-201ENST00000471002 296 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 RNU6-56P-201ENST00000516986 93 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 MTCYBP41-201ENST00000528913 1123 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AP002812.4-201ENST00000532139 286 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 MIR3162-201ENST00000581818 82 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC090616.5-202ENST00000582111 297 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 MIR3670-2-201ENST00000582974 65 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 MIR3670-1-201ENST00000584160 65 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 MIR3670-3-201ENST00000584855 65 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 ZNF92P3-201ENST00000596594 954 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC008277.2-201ENST00000605196 797 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC138473.1-201ENST00000605717 526 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 MIR3670-4-201ENST00000612260 65 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 MTCO1P24-201ENST00000515438 1558 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL049737.1-201ENST00000413920 1403 ntBASIC2.17□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
TCRBV4S1A1TA0A5B7 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AC062016.1-201ENST00000355719 319 ntBASIC2.16□□□□□ -2.06
TCRBV4S1A1TA0A5B7 MIR449A-201ENST00000362113 91 ntBASIC2.16□□□□□ -2.06
TCRBV4S1A1TA0A5B7 RNU6-859P-201ENST00000362728 107 ntBASIC2.16□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL031679.1-201ENST00000400616 525 ntBASIC2.16□□□□□ -2.06
TCRBV4S1A1TA0A5B7 RNU2-52P-201ENST00000410680 190 ntBASIC2.16□□□□□ -2.06
TCRBV4S1A1TA0A5B7 RAD23BP2-201ENST00000416003 1207 ntBASIC2.16□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.16□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.16□□□□□ -2.06
TCRBV4S1A1TA0A5B7 HSPE1P1-201ENST00000421494 318 ntBASIC2.16□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.16□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL513175.2-201ENST00000422071 443 ntBASIC2.16□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL160175.1-201ENST00000428124 247 ntBASIC2.16□□□□□ -2.06
TCRBV4S1A1TA0A5B7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.16□□□□□ -2.06
TCRBV4S1A1TA0A5B7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.16□□□□□ -2.06
TCRBV4S1A1TA0A5B7 ARL5AP3-201ENST00000439327 386 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms