Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 RPS3AP23-201ENST00000401762 784 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 SNORD23.1-201ENST00000408212 104 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 RNU4-78P-201ENST00000410940 126 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 TMEM167AP1-201ENST00000423409 219 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 MTCO2P17-201ENST00000424336 677 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 ATP5JP1-201ENST00000431631 322 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 TEX41-205ENST00000431734 529 ntTSL 4 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AC122718.1-201ENST00000439448 744 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 BUD31P2-201ENST00000449374 300 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 PSPHP1-201ENST00000450062 261 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 OR6C72P-201ENST00000451403 892 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 RNU6-717P-201ENST00000459076 104 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 NAP1L1P3-201ENST00000462291 880 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 RPL31P41-201ENST00000477967 372 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AC105137.1-201ENST00000484355 562 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 RPS27P26-201ENST00000494583 239 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AC021678.1-201ENST00000505195 936 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 NDUFB4P2-201ENST00000509515 391 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AC026402.1-201ENST00000513642 170 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 IGKV2D-36-201ENST00000518643 226 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AP003730.1-201ENST00000524605 285 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AP002812.4-201ENST00000532139 286 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 OR11H5P-201ENST00000554039 926 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 HSPE1P3-201ENST00000559254 309 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AP005205.1-201ENST00000563503 508 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AC020978.7-201ENST00000575953 1187 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 MIR4635-201ENST00000583759 79 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AP001330.4-201ENST00000604350 154 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AC005332.10-201ENST00000612725 619 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 AC138932.5-201ENST00000617759 563 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 U6.48-201ENST00000618523 106 ntBASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
LINC01558Q9Y6Z2 NSRP1P1-201ENST00000444067 1693 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 RN7SKP184-201ENST00000362348 333 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 RNA5SP68-201ENST00000363885 119 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 SNORA38-201ENST00000363946 132 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 RNU6-374P-201ENST00000364146 108 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 SNORA16B-201ENST00000364674 135 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 SNORA7.4-201ENST00000384249 137 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 MIR17-201ENST00000385012 84 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 AL030996.1-201ENST00000411430 235 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 NPM1P11-201ENST00000417106 855 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 C4BPAP2-201ENST00000428434 478 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 NDUFA5P10-201ENST00000432147 357 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 AC098826.1-201ENST00000433943 471 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 AL157827.1-201ENST00000447622 132 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 AL359385.1-201ENST00000456509 365 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 RPS7P7-201ENST00000463499 571 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 AC117440.1-201ENST00000474107 571 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 RNU1-40P-201ENST00000516816 164 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 RNU1-97P-201ENST00000516872 164 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 SNORA31.21-201ENST00000517180 77 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 AC083923.1-201ENST00000523708 376 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 COX6CP5-201ENST00000527162 228 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 AL121603.1-201ENST00000553815 142 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 AL121594.4-201ENST00000556211 1196 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 ZNF92P3-201ENST00000596594 954 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 AC106900.2-201ENST00000604994 317 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 AL162574.2-201ENST00000614618 657 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 AC114781.5-201ENST00000615297 108 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 AC123912.3-201ENST00000600907 1367 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 C4BPAP1-201ENST00000415474 1893 ntBASIC1.29□□□□□ -2.2
LINC01558Q9Y6Z2 AC010680.1-201ENST00000590024 3590 ntBASIC1.28□□□□□ -2.2
LINC01558Q9Y6Z2 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms