Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MIR3672-201ENST00000584290 82 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 AC006254.3-201ENST00000603353 884 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 Z98751.3-201ENST00000604447 521 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 AC064801.1-201ENST00000612025 407 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 AC091925.2-201ENST00000625059 256 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 AC010149.2-201ENST00000637608 315 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 AC074101.1-201ENST00000637861 241 ntBASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.99□□□□□ -1.29
PDZRN3Q9UPQ7 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 RNU6-1252P-201ENST00000363054 104 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 Y_RNA.276-201ENST00000364732 109 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 RNY1P5-201ENST00000383890 115 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 RNU6-190P-201ENST00000384154 102 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 RNU6-22P-201ENST00000384355 107 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 RNU6-328P-201ENST00000390887 106 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AL450992.3-201ENST00000413192 568 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AC234781.4-201ENST00000419384 244 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AC093655.2-201ENST00000425735 631 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AC104837.2-201ENST00000427236 424 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 PSMD10P3-201ENST00000437000 448 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 RPS29P22-201ENST00000472363 168 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 RNA5SP228-201ENST00000516232 133 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 RNU6-885P-201ENST00000516607 104 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 RNA5SP135-201ENST00000517019 125 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AC068993.1-201ENST00000546724 589 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 MIR3691-201ENST00000578066 90 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AC098848.2-201ENST00000588023 330 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AC010632.3-201ENST00000611377 369 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AC008013.2-202ENST00000637965 364 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PDZRN3Q9UPQ7 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 AP005432.1-201ENST00000580891 3485 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 Y_RNA.25-201ENST00000362528 102 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 SNORD3E-201ENST00000362899 217 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 RNU6-492P-201ENST00000363035 104 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 RNU6-657P-201ENST00000383904 107 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 Y_RNA.577-201ENST00000384794 101 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 OR6C66P-201ENST00000414917 930 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 ELOCP20-201ENST00000422460 345 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 PDSS1P1-201ENST00000422953 1114 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 RSU1P2-202ENST00000437884 485 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 RPL7P59-201ENST00000447700 943 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 AC097493.1-201ENST00000463958 372 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 RNU6-479P-201ENST00000516348 105 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 Y_RNA.715-201ENST00000517082 110 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 AC135001.1-201ENST00000544546 283 ntBASIC6.97□□□□□ -1.29
PDZRN3Q9UPQ7 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms