Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 AL158801.5-201ENST00000623123 465 ntBASIC4.44□□□□□ -1.7
PACSIN3Q9UKS6 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.44□□□□□ -1.7
PACSIN3Q9UKS6 AC026634.1-201ENST00000634369 198 ntBASIC4.44□□□□□ -1.7
PACSIN3Q9UKS6 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PACSIN3Q9UKS6 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
PACSIN3Q9UKS6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.44□□□□□ -1.7
PACSIN3Q9UKS6 AC027228.2-201ENST00000567141 2154 ntBASIC4.44□□□□□ -1.7
PACSIN3Q9UKS6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PACSIN3Q9UKS6 AC068254.2-201ENST00000623938 3577 ntBASIC4.44□□□□□ -1.7
PACSIN3Q9UKS6 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.44□□□□□ -1.7
PACSIN3Q9UKS6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC090017.1-201ENST00000548612 1779 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 GNG5P1-201ENST00000255500 204 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 OR5J1P-201ENST00000313544 939 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC067945.1-201ENST00000342609 618 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 Y_RNA.67-201ENST00000362870 100 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 Y_RNA.72-201ENST00000362894 103 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 Y_RNA.159-201ENST00000363674 87 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 RNY3P3-201ENST00000363816 102 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 RNU6-657P-201ENST00000383904 107 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 SNORA51.12-201ENST00000384448 134 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 OR9R1P-201ENST00000412200 877 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 SNRPEP10-201ENST00000420249 274 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 RPEP2-201ENST00000432149 701 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 USP9YP15-201ENST00000442391 422 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 RPL17P49-201ENST00000443728 411 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC140076.1-201ENST00000449897 361 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC010733.1-201ENST00000451515 401 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC079168.2-201ENST00000453977 416 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 MTND1P12-201ENST00000455231 147 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 RPL23AP65-201ENST00000475608 468 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC112204.1-201ENST00000502591 103 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC139783.2-201ENST00000504847 1145 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC114967.1-201ENST00000504890 259 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 GAPDHP56-201ENST00000506031 988 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 HIGD1AP6-201ENST00000521833 279 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC068587.4-201ENST00000533893 186 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AP003034.1-201ENST00000534621 422 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 PSMA3P-201ENST00000555485 635 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 MIR5699-201ENST00000578903 90 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 MIR3667-201ENST00000581025 74 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC090312.2-201ENST00000582687 378 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 MIR4737-201ENST00000583979 81 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC245014.2-201ENST00000603689 287 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC246785.4-201ENST00000605374 287 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC093838.1-201ENST00000613014 469 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AC099654.2-201ENST00000433031 1980 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 AL031119.1-201ENST00000404707 1879 ntBASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.43□□□□□ -1.7
PACSIN3Q9UKS6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PACSIN3Q9UKS6 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.42□□□□□ -1.7
PACSIN3Q9UKS6 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PACSIN3Q9UKS6 ASNSP1-204ENST00000641977 1664 ntBASIC4.42□□□□□ -1.7
PACSIN3Q9UKS6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PACSIN3Q9UKS6 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PACSIN3Q9UKS6 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PACSIN3Q9UKS6 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PACSIN3Q9UKS6 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PACSIN3Q9UKS6 RNA5SP52-201ENST00000362448 134 ntBASIC4.42□□□□□ -1.7
PACSIN3Q9UKS6 RNU1-108P-201ENST00000362556 161 ntBASIC4.42□□□□□ -1.7
PACSIN3Q9UKS6 RNU6-451P-201ENST00000362921 107 ntBASIC4.42□□□□□ -1.7
PACSIN3Q9UKS6 RNU6-289P-201ENST00000364093 107 ntBASIC4.42□□□□□ -1.7
PACSIN3Q9UKS6 RNU6-359P-201ENST00000365466 108 ntBASIC4.42□□□□□ -1.7
PACSIN3Q9UKS6 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms