Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 Y_RNA.311-201ENST00000365068 96 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 SNORD116-8-201ENST00000384365 95 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 BX890604.2-201ENST00000427883 474 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AP000907.1-201ENST00000428428 510 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 B3GNT2P1-201ENST00000434960 952 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 FTH1P1-201ENST00000437933 532 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AL354941.1-201ENST00000438600 464 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AL109741.2-201ENST00000455561 343 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC023598.1-201ENST00000472521 361 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC084357.1-201ENST00000473404 255 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC110792.2-201ENST00000510278 224 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 SNORA64.4-201ENST00000516632 81 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 RNU6-1261P-201ENST00000517194 104 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 RN7SL600P-201ENST00000581811 299 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC013444.2-201ENST00000603317 787 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC009220.3-201ENST00000604318 586 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC091946.2-201ENST00000606105 291 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC099778.2-201ENST00000610904 211 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC093783.1-201ENST00000612976 329 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AL357559.1-201ENST00000622228 274 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC103706.2-201ENST00000638080 240 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC007823.1-201ENST00000569932 1566 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC092326.2-201ENST00000624772 1561 ntBASIC3.46□□□□□ -1.86
NDE1Q9NXR1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.46□□□□□ -1.86
NDE1Q9NXR1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 MTND5P27-201ENST00000428871 1720 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 OR4A15-201ENST00000314706 1035 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 RNU1-85P-201ENST00000364127 164 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 RNU6-1200P-201ENST00000384162 107 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 RNU6-921P-201ENST00000384361 107 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AL590084.2-201ENST00000401481 382 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AL450338.1-201ENST00000407987 512 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 RNU4-72P-201ENST00000410754 173 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 RPL31P54-201ENST00000429803 370 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC023347.2-201ENST00000433994 462 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 MTCYBP34-201ENST00000439552 670 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 snoU13.7-201ENST00000459220 104 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 RN7SL594P-201ENST00000470590 287 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC013828.1-201ENST00000481845 158 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC105137.1-201ENST00000484355 562 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC090071.1-201ENST00000507713 644 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 RNU6-759P-201ENST00000516740 103 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC105185.1-201ENST00000518705 535 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC026333.2-201ENST00000542164 106 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC090502.2-201ENST00000549267 280 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 MTCYBP27-201ENST00000555160 670 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 MIR4504-201ENST00000577413 92 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 VN1R82P-201ENST00000601481 356 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC068790.4-201ENST00000602474 263 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC011468.4-201ENST00000603942 409 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC106791.2-201ENST00000604680 391 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC006077.1-201ENST00000604746 343 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AL359535.1-201ENST00000612100 1087 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms