Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AC139713.2-215ENST00000641428 5037 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 MTND5P3-201ENST00000438536 1800 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 RNU6-181P-201ENST00000363225 107 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 Y_RNA.450-201ENST00000384198 113 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 RPL7P60-201ENST00000397636 735 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 CALM2P3-201ENST00000400429 449 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 RNA5SP146-201ENST00000410743 123 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 RNU4-78P-201ENST00000410940 126 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AL137014.1-201ENST00000420490 1226 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 MTND1P2-201ENST00000430604 821 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 TPT1P14-201ENST00000448018 505 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AC009127.1-201ENST00000467090 155 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AC079382.1-201ENST00000493346 557 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 RPS4XP20-201ENST00000505751 772 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 RNA5SP360-201ENST00000516555 118 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 RNU6-445P-201ENST00000516949 107 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 Y_RNA.719-201ENST00000517156 106 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AC022882.1-201ENST00000532142 501 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AP003034.1-201ENST00000534621 422 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 HMGB1P33-201ENST00000563485 527 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 ATP5J2P6-201ENST00000565203 266 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 RNA5SP108-201ENST00000605921 117 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AC007038.2-201ENST00000608095 740 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AC006065.5-201ENST00000623427 349 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AC091905.4-201ENST00000623432 202 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AC244258.1-201ENST00000637553 1071 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AL138713.1-201ENST00000624026 2130 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 AC004520.1-201ENST00000608362 1413 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 INTS6P1-201ENST00000504674 2530 ntBASIC4.63□□□□□ -1.67
CCM2LQ9NUG4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 LINC01355-201ENST00000566551 5444 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC092435.4-201ENST00000623012 4159 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 RNA5SP372-201ENST00000390836 115 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AL078595.1-201ENST00000404458 226 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 RPS4XP9-201ENST00000405151 780 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 MIR1277-201ENST00000408536 78 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 RNU2-47P-201ENST00000410649 186 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 RNU2-62P-201ENST00000410868 191 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC092447.6-201ENST00000414578 210 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 CCDC58P2-201ENST00000417131 366 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC016712.1-201ENST00000431088 378 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC010655.1-201ENST00000449336 292 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 MTND2P24-201ENST00000453434 806 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 RNU7-59P-201ENST00000459101 61 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 RN7SL385P-201ENST00000468873 276 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 NIP7P2-201ENST00000485801 544 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC009646.1-201ENST00000510455 318 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC105914.1-201ENST00000511798 226 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 RNU6-798P-201ENST00000516912 103 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 RNA5SP337-201ENST00000517007 109 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 RNU4-60P-201ENST00000517239 135 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC134698.5-201ENST00000519444 336 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms