Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC012417.1-201ENST00000582307 1039 ntBASIC3.94□□□□□ -1.78
BRF2Q9HAW0 AP001004.1-201ENST00000582468 324 ntBASIC3.94□□□□□ -1.78
BRF2Q9HAW0 MIR4443-201ENST00000585052 53 ntBASIC3.94□□□□□ -1.78
BRF2Q9HAW0 AC012669.1-201ENST00000603209 283 ntBASIC3.94□□□□□ -1.78
BRF2Q9HAW0 Z94722.1-201ENST00000604328 474 ntBASIC3.94□□□□□ -1.78
BRF2Q9HAW0 uc_338.32-201ENST00000615087 172 ntBASIC3.94□□□□□ -1.78
BRF2Q9HAW0 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.94□□□□□ -1.78
BRF2Q9HAW0 AC233309.1-201ENST00000619522 751 ntBASIC3.94□□□□□ -1.78
BRF2Q9HAW0 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.94□□□□□ -1.78
BRF2Q9HAW0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
BRF2Q9HAW0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
BRF2Q9HAW0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
BRF2Q9HAW0 CR383658.2-201ENST00000547576 1525 ntBASIC3.94□□□□□ -1.78
BRF2Q9HAW0 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.94□□□□□ -1.78
BRF2Q9HAW0 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
BRF2Q9HAW0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.94□□□□□ -1.78
BRF2Q9HAW0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC095050.2-201ENST00000510748 1458 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 RNU6-600P-201ENST00000362524 99 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 RNU6-97P-201ENST00000363387 104 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 RNU6-1155P-201ENST00000363554 107 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 RNU6-343P-201ENST00000364709 104 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 U3.22-201ENST00000391120 215 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC025750.1-201ENST00000399891 379 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 RNA5SP306-201ENST00000411087 107 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 RPL37P18-201ENST00000411602 243 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 CCDC58P2-201ENST00000417131 366 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 Z83846.1-201ENST00000446798 265 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC097262.1-201ENST00000452559 548 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC091167.1-201ENST00000492017 396 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC034222.1-201ENST00000494052 532 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC139783.2-201ENST00000504847 1145 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC022447.3-201ENST00000506865 495 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC108475.1-201ENST00000507880 950 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AL139395.1-201ENST00000603662 160 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC011451.2-201ENST00000604303 598 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC114878.2-201ENST00000604863 1251 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC097468.3-201ENST00000607956 456 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC128687.2-201ENST00000609657 566 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC106028.5-201ENST00000610332 395 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC114781.5-201ENST00000615297 108 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 MIR4727-201ENST00000622232 55 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 MIR3653-201ENST00000625572 110 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AC006927.3-201ENST00000638789 384 ntBASIC3.93□□□□□ -1.78
BRF2Q9HAW0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.93□□□□□ -1.78
BRF2Q9HAW0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.92□□□□□ -1.78
BRF2Q9HAW0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
BRF2Q9HAW0 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.92□□□□□ -1.78
BRF2Q9HAW0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
BRF2Q9HAW0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.92□□□□□ -1.78
BRF2Q9HAW0 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.92□□□□□ -1.78
BRF2Q9HAW0 MIR383-201ENST00000362257 73 ntBASIC3.92□□□□□ -1.78
BRF2Q9HAW0 RNU6-744P-201ENST00000365557 107 ntBASIC3.92□□□□□ -1.78
BRF2Q9HAW0 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.92□□□□□ -1.78
BRF2Q9HAW0 RNU6-1074P-201ENST00000383995 104 ntBASIC3.92□□□□□ -1.78
BRF2Q9HAW0 RNU6-1316P-201ENST00000384242 108 ntBASIC3.92□□□□□ -1.78
BRF2Q9HAW0 MIR585-201ENST00000384887 94 ntBASIC3.92□□□□□ -1.78
BRF2Q9HAW0 AL356421.1-201ENST00000403255 413 ntBASIC3.92□□□□□ -1.78
BRF2Q9HAW0 MIR1305-201ENST00000408300 86 ntBASIC3.92□□□□□ -1.78
BRF2Q9HAW0 RNU2-47P-201ENST00000410649 186 ntBASIC3.92□□□□□ -1.78
BRF2Q9HAW0 MTCO1P17-201ENST00000411522 491 ntBASIC3.92□□□□□ -1.78
BRF2Q9HAW0 RPL23AP26-201ENST00000412728 464 ntBASIC3.92□□□□□ -1.78
BRF2Q9HAW0 FAR2P2-201ENST00000413041 594 ntBASIC3.92□□□□□ -1.78
BRF2Q9HAW0 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.92□□□□□ -1.78
BRF2Q9HAW0 RPL26P29-201ENST00000415623 438 ntBASIC3.92□□□□□ -1.78
BRF2Q9HAW0 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.92□□□□□ -1.78
BRF2Q9HAW0 COX6CP17-201ENST00000421389 185 ntBASIC3.92□□□□□ -1.78
BRF2Q9HAW0 BEND7P1-201ENST00000422058 457 ntBASIC3.92□□□□□ -1.78
BRF2Q9HAW0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.92□□□□□ -1.78
BRF2Q9HAW0 AL358472.1-201ENST00000431295 329 ntBASIC3.92□□□□□ -1.78
BRF2Q9HAW0 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.92□□□□□ -1.78
BRF2Q9HAW0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.92□□□□□ -1.78
BRF2Q9HAW0 RPL36AP33-201ENST00000450395 310 ntBASIC3.92□□□□□ -1.78
BRF2Q9HAW0 MTND1P9-201ENST00000453775 944 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms