Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 BX649567.1-201ENST00000642071 1134 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 Z83843.1-201ENST00000604070 3685 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 ZNF807-201ENST00000328088 1707 ntBASIC3.33□□□□□ -1.88
LRRC40Q9H9A6 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 OR5H2-201ENST00000355273 945 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 RNU6-251P-201ENST00000363235 104 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 U3.11-201ENST00000364476 212 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 RNA5SP44-201ENST00000410446 133 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 AC092447.6-201ENST00000414578 210 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 AC099677.1-201ENST00000420575 175 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 AC012497.1-201ENST00000429392 575 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 SNRPEP4-201ENST00000435815 279 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 RPL23AP22-201ENST00000437556 453 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 RPL21P133-201ENST00000443666 476 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 AC125238.1-201ENST00000448842 249 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 MTND2P19-201ENST00000449129 1012 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 AC115115.1-201ENST00000449927 248 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 RPL23AP31-201ENST00000456160 467 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 FAM133DP-201ENST00000464802 691 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 RNA5SP135-201ENST00000517019 125 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 AC006518.2-201ENST00000542513 940 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 AC007458.1-201ENST00000542812 373 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 AC093519.1-201ENST00000566109 298 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 AC012669.1-201ENST00000603209 283 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 AC055876.5-201ENST00000605667 259 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 VN1R74P-201ENST00000613259 503 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 AL161637.1-201ENST00000622380 412 ntBASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRRC40Q9H9A6 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 RNU6-549P-201ENST00000384433 107 ntBASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 U3.29-201ENST00000391296 212 ntBASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 BX323014.1-201ENST00000412876 237 ntBASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 AC006960.1-201ENST00000419980 153 ntBASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 AC005019.1-201ENST00000436455 431 ntBASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 MOB1AP2-201ENST00000446060 614 ntBASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 AC091564.1-201ENST00000464563 479 ntBASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 AC015908.1-201ENST00000478739 476 ntBASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 RNA5SP217-201ENST00000515959 91 ntBASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 ERHP1-201ENST00000523006 310 ntBASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 AC018630.1-201ENST00000541376 925 ntBASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 EEF1B2P4-201ENST00000551398 348 ntBASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 AL391156.1-201ENST00000554965 554 ntBASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 AC090666.1-201ENST00000578241 445 ntBASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 AC073657.2-201ENST00000605661 303 ntBASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 AC015967.1-201ENST00000619893 476 ntBASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.31□□□□□ -1.88
LRRC40Q9H9A6 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 RNU1-33P-201ENST00000364249 162 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 SNORA51.6-201ENST00000384151 125 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 AL024474.1-201ENST00000404655 591 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 RNU6-1077P-201ENST00000410506 102 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 OR1AA1P-201ENST00000419597 916 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 HSPE1P1-201ENST00000421494 318 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 AC233728.2-201ENST00000425348 757 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 MTCYBP34-201ENST00000439552 670 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 AL158053.1-201ENST00000441503 453 ntBASIC3.3□□□□□ -1.88
LRRC40Q9H9A6 RPL36AP33-201ENST00000450395 310 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms