Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC087312.1-201ENST00000471411 480 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 RPL7P18-201ENST00000478965 734 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 TRBV12-2-201ENST00000489763 344 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AL024509.2-201ENST00000493462 493 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 UBE2CP3-201ENST00000502715 450 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 MTCO2P32-201ENST00000514865 403 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 SUMO2P20-201ENST00000520803 283 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 OR5AK1P-201ENST00000524837 922 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AC024224.1-201ENST00000538284 609 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 HSPE1P3-201ENST00000559254 309 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 U7.8-201ENST00000619968 63 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AP000484.1-201ENST00000620067 1252 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AC091905.1-201ENST00000624400 311 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AC091925.2-201ENST00000625059 256 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AP000776.1-201ENST00000530032 1663 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AL365440.1-201ENST00000436135 2167 ntBASIC3.51□□□□□ -1.85
UBQLN3Q9H347 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.51□□□□□ -1.85
UBQLN3Q9H347 AC116096.1-201ENST00000566804 2314 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 AL390862.1-201ENST00000635467 1469 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 RNU6-83P-201ENST00000384568 112 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 MIR554-201ENST00000384874 96 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 MIR1284-201ENST00000408337 120 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 RN7SKP156-201ENST00000410308 342 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 AL008987.1-201ENST00000415528 237 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 RPL21P109-201ENST00000422213 475 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 AL445584.1-201ENST00000431451 330 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 RPS25P9-201ENST00000435591 252 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 MTCO2P20-201ENST00000437339 673 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 MTND4P6-201ENST00000438297 472 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 NOTCH2P1-201ENST00000443481 624 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 AL591719.1-201ENST00000444669 744 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 RPL26P28-201ENST00000451325 435 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 HMGB1P15-201ENST00000453854 435 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 CFTRP1-201ENST00000456646 183 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 AC114981.1-201ENST00000503897 678 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 HMGB3P15-201ENST00000507326 574 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 AC006390.1-201ENST00000508068 283 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 AC004062.1-201ENST00000509926 645 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 AC093853.1-201ENST00000515689 483 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 IGKV2D-19-201ENST00000523346 262 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 AC004987.4-201ENST00000603383 338 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 AC011330.2-201ENST00000621680 635 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 OTUD4P1-201ENST00000237841 3067 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 AL161912.2-201ENST00000565707 3007 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 MTND5P24-201ENST00000438892 1767 ntBASIC3.5□□□□□ -1.85
UBQLN3Q9H347 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
UBQLN3Q9H347 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 RNU6-50P-201ENST00000362356 103 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 RNU6-621P-201ENST00000364752 109 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 RNU6ATAC-201ENST00000408749 126 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 RNA5SP129-201ENST00000410276 118 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 RN7SKP27-201ENST00000410684 333 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 SNORA57.3-201ENST00000411095 141 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms