Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AC068880.5-201ENST00000624331 290 ntBASIC2.65□□□□□ -1.99
VCX3BQ9H321 AC097372.4-201ENST00000625025 466 ntBASIC2.65□□□□□ -1.99
VCX3BQ9H321 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
VCX3BQ9H321 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
VCX3BQ9H321 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.65□□□□□ -1.99
VCX3BQ9H321 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
VCX3BQ9H321 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.64□□□□□ -1.99
VCX3BQ9H321 AC092593.1-201ENST00000515413 1815 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.64□□□□□ -1.99
VCX3BQ9H321 OR6K3-202ENST00000368146 996 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
VCX3BQ9H321 Y_RNA.493-201ENST00000384422 102 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 SNORA80E-201ENST00000384744 137 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 TAF9BP1-201ENST00000396646 746 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 RNA5SP56-201ENST00000410277 118 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 RPL7P8-201ENST00000411964 730 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.64□□□□□ -1.99
VCX3BQ9H321 HSFY4P-201ENST00000415994 1181 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.64□□□□□ -1.99
VCX3BQ9H321 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.64□□□□□ -1.99
VCX3BQ9H321 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 DUTP6-201ENST00000425573 462 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 AL121578.1-201ENST00000428051 892 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 AC114973.1-201ENST00000429057 632 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC2.64□□□□□ -1.99
VCX3BQ9H321 RPS12P2-201ENST00000439728 269 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.64□□□□□ -1.99
VCX3BQ9H321 RPL26P28-201ENST00000451325 435 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 RN7SL863P-201ENST00000462370 296 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 AC133134.1-201ENST00000466800 359 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
VCX3BQ9H321 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VCX3BQ9H321 AC109925.1-201ENST00000478069 331 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 MRPL42P6-201ENST00000486397 371 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC2.64□□□□□ -1.99
VCX3BQ9H321 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.64□□□□□ -1.99
VCX3BQ9H321 AC114322.1-201ENST00000506771 926 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.64□□□□□ -1.99
VCX3BQ9H321 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.64□□□□□ -1.99
VCX3BQ9H321 AC087272.1-201ENST00000523624 533 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.64□□□□□ -1.99
VCX3BQ9H321 AC007115.1-201ENST00000546853 234 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.64□□□□□ -1.99
VCX3BQ9H321 AC006130.2-201ENST00000586202 326 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 ZNF861P-201ENST00000588126 639 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.64□□□□□ -1.99
VCX3BQ9H321 VN1R78P-201ENST00000597393 564 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 MIR6719-201ENST00000622428 87 ntBASIC2.64□□□□□ -1.99
VCX3BQ9H321 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
VCX3BQ9H321 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VCX3BQ9H321 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VCX3BQ9H321 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.63□□□□□ -1.99
VCX3BQ9H321 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VCX3BQ9H321 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
VCX3BQ9H321 RNU6-386P-201ENST00000362650 107 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 RNU6-670P-201ENST00000364312 104 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 SNORA11.5-201ENST00000408163 128 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 AC073264.1-201ENST00000411508 416 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 Z75741.2-201ENST00000417272 1167 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 RPL7P2-201ENST00000427639 268 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.63□□□□□ -1.99
VCX3BQ9H321 ARL5AP3-201ENST00000439327 386 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 AC016724.1-201ENST00000453215 421 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC2.63□□□□□ -1.99
VCX3BQ9H321 HMGN1P8-201ENST00000463578 288 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 AC104687.1-201ENST00000485829 412 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.63□□□□□ -1.99
VCX3BQ9H321 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2.63□□□□□ -1.99
VCX3BQ9H321 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.63□□□□□ -1.99
VCX3BQ9H321 AC008494.2-201ENST00000514544 370 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC2.63□□□□□ -1.99
VCX3BQ9H321 IGLV3-17-201ENST00000519099 244 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.63□□□□□ -1.99
VCX3BQ9H321 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.63□□□□□ -1.99
VCX3BQ9H321 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
VCX3BQ9H321 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.63□□□□□ -1.99
VCX3BQ9H321 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VCX3BQ9H321 MIR5694-201ENST00000581190 76 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.63□□□□□ -1.99
VCX3BQ9H321 XIAPP1-201ENST00000603162 600 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 HMGB1P51-201ENST00000605166 638 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 AC008277.2-201ENST00000605196 797 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 AL162574.2-201ENST00000614618 657 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
VCX3BQ9H321 AC244258.1-201ENST00000637553 1071 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 AC009093.8-201ENST00000641769 292 ntBASIC2.63□□□□□ -1.99
VCX3BQ9H321 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VCX3BQ9H321 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
VCX3BQ9H321 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.62□□□□□ -1.99
VCX3BQ9H321 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
VCX3BQ9H321 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.62□□□□□ -1.99
VCX3BQ9H321 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
VCX3BQ9H321 AL512646.1-201ENST00000269395 1077 ntBASIC2.62□□□□□ -1.99
VCX3BQ9H321 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
VCX3BQ9H321 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
VCX3BQ9H321 MIR142-201ENST00000384835 87 ntBASIC2.62□□□□□ -1.99
VCX3BQ9H321 MIR218-2-201ENST00000385006 110 ntBASIC2.62□□□□□ -1.99
VCX3BQ9H321 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.62□□□□□ -1.99
VCX3BQ9H321 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.62□□□□□ -1.99
VCX3BQ9H321 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms