Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC007529.1-201ENST00000418574 2178 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 Y_RNA.1-201ENST00000352915 104 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 RN7SKP227-201ENST00000364445 330 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 RNU6-398P-201ENST00000384143 109 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 RNU6-878P-201ENST00000384578 110 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 RNU6-146P-201ENST00000384602 108 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 Y_RNA.573-201ENST00000384763 105 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 BTBD10P2-201ENST00000404779 676 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 RN7SKP285-201ENST00000410137 318 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 RN7SKP247-201ENST00000411094 308 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC078974.1-201ENST00000411597 223 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AL109913.1-201ENST00000421173 514 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AL592293.2-201ENST00000422292 996 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AL353777.1-201ENST00000425552 326 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 RPL21P91-201ENST00000429231 479 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC068287.1-201ENST00000430283 295 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 RPL31P35-201ENST00000431058 377 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 BTF3P10-201ENST00000433415 495 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC002486.1-201ENST00000435098 391 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 HMGB1P31-201ENST00000437242 427 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC011753.3-201ENST00000443436 406 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC112498.1-201ENST00000444401 332 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC132479.1-201ENST00000449160 144 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC079168.2-201ENST00000453977 416 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 ZFRP1-201ENST00000457579 2970 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 RPS26P28-201ENST00000470806 348 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC087312.1-201ENST00000471411 480 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC023598.1-201ENST00000472521 361 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC010683.1-201ENST00000473673 378 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 RNU1-6P-201ENST00000516290 144 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC022616.6-201ENST00000520479 119 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC107918.3-201ENST00000533272 382 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 OR5AN2P-201ENST00000534535 896 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC092470.1-201ENST00000546187 132 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AL845331.3-202ENST00000562856 261 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 MIR4737-201ENST00000583979 81 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 RPL26P30-202ENST00000602923 645 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 FAM27B-201ENST00000610601 213 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC069234.5-201ENST00000611056 416 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC025253.1-201ENST00000613623 543 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC092794.2-201ENST00000620933 563 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AL732618.1-201ENST00000623251 301 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC091905.1-201ENST00000624400 311 ntBASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
AMBRA1Q9C0C7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AC024560.2-201ENST00000507981 1497 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AC008033.1-201ENST00000216407 1162 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 RNA5SP52-201ENST00000362448 134 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 FGF7P8-201ENST00000402994 292 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AL359704.1-201ENST00000411586 781 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AC127391.1-201ENST00000411737 98 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 RPL36AP36-201ENST00000418616 301 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AL035410.1-201ENST00000427409 427 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 MTCO2P19-201ENST00000427513 598 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AL353597.2-202ENST00000434901 373 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AC010733.1-201ENST00000451515 401 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms