Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 HMGN2P16-201ENST00000456802 261 ntBASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 RPL21P104-201ENST00000464143 478 ntBASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 AC126121.1-201ENST00000482313 553 ntBASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 AC010374.2-201ENST00000512933 535 ntBASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 SCGB1D5P-201ENST00000515134 247 ntBASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 RN7SKP277-201ENST00000516895 283 ntBASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 BDH2P1-201ENST00000602288 736 ntBASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 AL133393.1-201ENST00000603277 287 ntBASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 TUG1_1.1-201ENST00000610654 145 ntBASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 AL355379.1-201ENST00000405542 640 ntBASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 RPL23AP47-201ENST00000408017 460 ntBASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 NUP35P2-201ENST00000416748 943 ntBASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 CKS1BP5-201ENST00000434172 273 ntBASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 AC112492.1-201ENST00000449607 712 ntBASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 EEF1B2P7-201ENST00000451177 676 ntBASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 NIPA2P5-201ENST00000452282 464 ntBASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 TRBV12-1-201ENST00000479785 344 ntBASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 AC091826.1-201ENST00000514065 313 ntBASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 RNA5SP76-201ENST00000516277 87 ntBASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 RN7SKP282-201ENST00000516824 299 ntBASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 AP000857.1-201ENST00000532151 543 ntBASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 ATP5F1P7-201ENST00000567330 760 ntBASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 NRBF2P5-201ENST00000603087 788 ntBASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 AC005046.1-201ENST00000608515 625 ntBASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 CYCSP41-201ENST00000616920 296 ntBASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 Z99129.2-201ENST00000619967 314 ntBASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UPF3BQ9BZI7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 OR56A5-201ENST00000340110 738 ntBASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 EEF1A1P41-201ENST00000414667 207 ntBASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 RPL7P46-201ENST00000425129 740 ntBASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 SETP8-201ENST00000435341 628 ntBASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 OR7L1P-201ENST00000456181 380 ntBASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 ATG10-AS1-201ENST00000504846 648 ntBASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 SNORA31.26-201ENST00000517250 137 ntBASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 AL133271.1-201ENST00000538229 291 ntBASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 MIR4474-201ENST00000579189 78 ntBASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 U6.48-201ENST00000618523 106 ntBASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UPF3BQ9BZI7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 RNA5SP344-201ENST00000411081 104 ntBASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 AC093151.1-201ENST00000427711 313 ntBASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 RPL21P40-201ENST00000428586 483 ntBASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 AC000041.1-201ENST00000439655 175 ntBASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 AL662791.1-201ENST00000441992 928 ntBASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 NF1P3-201ENST00000457709 450 ntBASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 MTND2P26-201ENST00000528255 1029 ntBASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 AC007536.1-201ENST00000533382 349 ntBASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 MAGOH2P-202ENST00000584384 429 ntBASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 AC087241.4-201ENST00000612441 480 ntBASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
UPF3BQ9BZI7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
UPF3BQ9BZI7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 RNA5SP129-201ENST00000410276 118 ntBASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 RNU2-6P-201ENST00000411404 190 ntBASIC3.33□□□□□ -1.88
UPF3BQ9BZI7 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms