Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 AL359893.1-201ENST00000447628 1580 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 AC021146.4-201ENST00000309229 279 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 RNU6-744P-201ENST00000365557 107 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 RNU6-1316P-201ENST00000384242 108 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 RNU6-339P-201ENST00000384310 107 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 PTMAP5-201ENST00000393073 333 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 MIR1277-201ENST00000408536 78 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 Y_RNA.598-201ENST00000410480 95 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 OR51A5P-201ENST00000415429 942 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 NANOGP6-201ENST00000429190 847 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 AC099670.2-201ENST00000435130 321 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 RPL7P52-201ENST00000449200 742 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 USP9YP12-201ENST00000450481 570 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 PPIAP3-201ENST00000450588 505 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 snoU109.1-201ENST00000459339 135 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 RN7SL441P-201ENST00000492388 296 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 RPL9P6-201ENST00000492764 598 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 AC112204.1-201ENST00000502591 103 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 IGBP1P4-201ENST00000503202 879 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 RNU6-507P-201ENST00000516045 100 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 RNU1-103P-201ENST00000516502 125 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 AC009101.1-201ENST00000568135 242 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 AL359999.1-201ENST00000604513 294 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 AC091304.9-201ENST00000612091 226 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 CR381653.2-201ENST00000624041 768 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 Z95331.1-201ENST00000623075 23112 ntBASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
LRFN3Q9BTN0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 AC092681.1-201ENST00000297369 291 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 RN7SKP226-201ENST00000364912 300 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 RNU4-12P-201ENST00000365233 139 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 Y_RNA.582-201ENST00000391023 95 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 AC068533.1-201ENST00000418542 415 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 MTCYBP24-201ENST00000420387 1106 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 AL513174.1-201ENST00000423182 629 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 RPS12P5-201ENST00000423449 371 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 RWDD4P2-201ENST00000426392 563 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 RSU1P2-202ENST00000437884 485 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 MTCO3P18-201ENST00000440206 761 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 AL450023.3-201ENST00000440592 271 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 RPL23AP33-201ENST00000442301 452 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 RPL7P36-201ENST00000444633 681 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 AL590399.6-201ENST00000446396 307 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 MTND3P10-201ENST00000450967 341 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 RPL7P24-201ENST00000493052 752 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 RPL36AP41-201ENST00000493820 306 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 AL358832.1-201ENST00000497800 389 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 MTCO3P44-201ENST00000510977 541 ntBASIC4.68□□□□□ -1.66
LRFN3Q9BTN0 KCTD9P2-201ENST00000512203 1013 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms