Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.73□□□□□ -1.81
CMTM3Q96MX0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CMTM3Q96MX0 HIGD1AP10-201ENST00000527837 282 ntBASIC3.73□□□□□ -1.81
CMTM3Q96MX0 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.73□□□□□ -1.81
CMTM3Q96MX0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.73□□□□□ -1.81
CMTM3Q96MX0 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.73□□□□□ -1.81
CMTM3Q96MX0 MIR3186-201ENST00000577404 85 ntBASIC3.73□□□□□ -1.81
CMTM3Q96MX0 MIR5047-201ENST00000579212 100 ntBASIC3.73□□□□□ -1.81
CMTM3Q96MX0 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.73□□□□□ -1.81
CMTM3Q96MX0 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.73□□□□□ -1.81
CMTM3Q96MX0 AC234771.5-201ENST00000600161 514 ntBASIC3.73□□□□□ -1.81
CMTM3Q96MX0 AL163642.2-201ENST00000604722 1019 ntBASIC3.73□□□□□ -1.81
CMTM3Q96MX0 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CMTM3Q96MX0 AC211433.2-201ENST00000608433 387 ntBASIC3.73□□□□□ -1.81
CMTM3Q96MX0 AC128687.2-201ENST00000609657 566 ntBASIC3.73□□□□□ -1.81
CMTM3Q96MX0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.73□□□□□ -1.81
CMTM3Q96MX0 MIR7844-201ENST00000616161 122 ntBASIC3.73□□□□□ -1.81
CMTM3Q96MX0 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.73□□□□□ -1.81
CMTM3Q96MX0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.73□□□□□ -1.81
CMTM3Q96MX0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CMTM3Q96MX0 AL161637.1-201ENST00000622380 412 ntBASIC3.73□□□□□ -1.81
CMTM3Q96MX0 AC127502.3-201ENST00000636170 1206 ntBASIC3.73□□□□□ -1.81
CMTM3Q96MX0 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.73□□□□□ -1.81
CMTM3Q96MX0 AC006378.2-201ENST00000623178 2476 ntBASIC3.73□□□□□ -1.81
CMTM3Q96MX0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.73□□□□□ -1.81
CMTM3Q96MX0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CMTM3Q96MX0 TAB3P1-202ENST00000452645 1634 ntBASIC3.73□□□□□ -1.81
CMTM3Q96MX0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CMTM3Q96MX0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CMTM3Q96MX0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 CR383658.2-201ENST00000547576 1525 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 OR11H4-201ENST00000315409 1082 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 RNU6-50P-201ENST00000362356 103 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 RNU6-1078P-201ENST00000364522 103 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 Y_RNA.560-201ENST00000384689 102 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 U3.20-201ENST00000390909 217 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 RNA5SP332-201ENST00000391063 115 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AL031577.2-201ENST00000404133 280 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AP000567.1-201ENST00000406413 156 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 MIR1178-201ENST00000408396 91 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 RNA5SP129-201ENST00000410276 118 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 RNU6-920P-201ENST00000410926 92 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 RPS12P10-201ENST00000427031 377 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 THAP5P1-201ENST00000439089 262 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 RPL23AP93-201ENST00000440847 484 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 FAM103A2P-201ENST00000444122 354 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 RPL23AP31-201ENST00000456160 467 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 RPS27AP17-201ENST00000463344 455 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AC069499.1-201ENST00000489433 509 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AL139099.1-201ENST00000497398 403 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AC022483.1-201ENST00000514020 567 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AC119751.5-201ENST00000514077 770 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 RNA5SP468-201ENST00000516782 93 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AP000827.1-201ENST00000527814 258 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AC105233.3-201ENST00000531125 744 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AC006064.5-201ENST00000541782 248 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AL109766.1-201ENST00000555080 552 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AL357094.1-201ENST00000603845 844 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AP001330.4-201ENST00000604350 154 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AL592436.1-201ENST00000605135 558 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AC012443.1-201ENST00000605605 231 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AL158211.4-201ENST00000606988 584 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 MIR486-1-201ENST00000612171 68 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 MIR6130-201ENST00000619419 109 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AL356266.1-201ENST00000623311 483 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AF246928.1-201ENST00000623768 87 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AP005264.7-201ENST00000625003 745 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 FP325313.1-201ENST00000638228 703 ntBASIC3.72□□□□□ -1.81
CMTM3Q96MX0 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CMTM3Q96MX0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.71□□□□□ -1.81
CMTM3Q96MX0 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 AC010928.1-201ENST00000592477 1447 ntBASIC3.71□□□□□ -1.82
CMTM3Q96MX0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CMTM3Q96MX0 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms