Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 PABPC1P3-201ENST00000469174 459 ntBASIC4.58□□□□□ -1.68
SNX27Q96L92 RPS26P3-201ENST00000470205 348 ntBASIC4.58□□□□□ -1.68
SNX27Q96L92 AC090543.2-201ENST00000483963 348 ntBASIC4.58□□□□□ -1.68
SNX27Q96L92 AC004057.1-201ENST00000485827 348 ntBASIC4.58□□□□□ -1.68
SNX27Q96L92 AC090453.1-201ENST00000495560 436 ntBASIC4.58□□□□□ -1.68
SNX27Q96L92 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX27Q96L92 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.58□□□□□ -1.68
SNX27Q96L92 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX27Q96L92 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
SNX27Q96L92 IGLVIV-53-201ENST00000520107 367 ntBASIC4.58□□□□□ -1.68
SNX27Q96L92 IGKV2D-19-201ENST00000523346 262 ntBASIC4.58□□□□□ -1.68
SNX27Q96L92 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX27Q96L92 HIGD1AP10-201ENST00000527837 282 ntBASIC4.58□□□□□ -1.68
SNX27Q96L92 AC105233.3-201ENST00000531125 744 ntBASIC4.58□□□□□ -1.68
SNX27Q96L92 OR5B10P-201ENST00000532869 642 ntBASIC4.58□□□□□ -1.68
SNX27Q96L92 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX27Q96L92 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX27Q96L92 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX27Q96L92 SLC25A36P1-201ENST00000590111 465 ntBASIC4.58□□□□□ -1.68
SNX27Q96L92 AL139395.1-201ENST00000603662 160 ntBASIC4.58□□□□□ -1.68
SNX27Q96L92 AL139286.1-201ENST00000604465 483 ntBASIC4.58□□□□□ -1.68
SNX27Q96L92 AL009028.1-201ENST00000604895 802 ntBASIC4.58□□□□□ -1.68
SNX27Q96L92 AL137843.1-201ENST00000605078 385 ntBASIC4.58□□□□□ -1.68
SNX27Q96L92 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX27Q96L92 AC107214.2-201ENST00000608204 634 ntBASIC4.58□□□□□ -1.68
SNX27Q96L92 AC009318.4-201ENST00000620496 486 ntBASIC4.58□□□□□ -1.68
SNX27Q96L92 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
SNX27Q96L92 MIR4496-201ENST00000635896 61 ntBASIC4.58□□□□□ -1.68
SNX27Q96L92 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX27Q96L92 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX27Q96L92 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
SNX27Q96L92 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX27Q96L92 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.58□□□□□ -1.68
SNX27Q96L92 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX27Q96L92 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX27Q96L92 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SNX27Q96L92 MTCO1P23-201ENST00000415223 1526 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 CR383658.2-201ENST00000547576 1525 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SNX27Q96L92 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX27Q96L92 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX27Q96L92 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNX27Q96L92 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SNX27Q96L92 AL672167.1-206ENST00000356293 943 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 BTF3L4P1-201ENST00000413813 468 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX27Q96L92 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX27Q96L92 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX27Q96L92 ARPC3P5-201ENST00000448802 534 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 USP9YP34-201ENST00000453983 808 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX27Q96L92 RNA5SP246-201ENST00000458909 119 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 AC109486.1-201ENST00000486833 374 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 AC068724.1-201ENST00000487100 792 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX27Q96L92 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX27Q96L92 MTND5P4-201ENST00000514978 288 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 RN7SKP234-201ENST00000517173 224 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.57□□□□□ -1.68
SNX27Q96L92 HSPA8P13-201ENST00000523715 472 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SNX27Q96L92 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX27Q96L92 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX27Q96L92 GTF2IP22-201ENST00000554443 182 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNX27Q96L92 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX27Q96L92 OR4G1P-201ENST00000588632 938 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 AP001981.2-201ENST00000603241 418 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 AC025946.2-201ENST00000603398 234 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 AC092354.1-201ENST00000606057 376 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 AC084782.3-201ENST00000612282 578 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 AL158063.1-201ENST00000615349 536 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 AC025588.4-201ENST00000615802 908 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 AL031985.3-201ENST00000565390 2449 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 SAGE4P-201ENST00000442271 3381 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX27Q96L92 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.57□□□□□ -1.68
SNX27Q96L92 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX27Q96L92 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX27Q96L92 AC024560.2-201ENST00000507981 1497 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
SNX27Q96L92 MTND4P16-201ENST00000466108 1367 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX27Q96L92 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX27Q96L92 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX27Q96L92 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SNX27Q96L92 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SNX27Q96L92 Y_RNA.51-201ENST00000362725 102 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.56□□□□□ -1.68
SNX27Q96L92 MIR1179-201ENST00000408703 91 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.56□□□□□ -1.68
SNX27Q96L92 HMGB1P11-201ENST00000413899 637 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX27Q96L92 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.56□□□□□ -1.68
SNX27Q96L92 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX27Q96L92 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.56□□□□□ -1.68
SNX27Q96L92 PSMA2P3-201ENST00000429685 675 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.56□□□□□ -1.68
SNX27Q96L92 SNRPEP7-201ENST00000438350 220 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms