Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CALR3Q96L12 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CALR3Q96L12 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CALR3Q96L12 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CALR3Q96L12 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CALR3Q96L12 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CALR3Q96L12 AC008627.1-201ENST00000517511 1704 ntBASIC6.08□□□□□ -1.44
CALR3Q96L12 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CALR3Q96L12 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC6.07□□□□□ -1.44
CALR3Q96L12 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.07□□□□□ -1.44
CALR3Q96L12 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 Y_RNA.197-201ENST00000364004 102 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 RN7SKP69-201ENST00000365390 305 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 SNORA33.2-201ENST00000365413 134 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 RNU6-190P-201ENST00000384154 102 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 RNU6-393P-201ENST00000384475 107 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CALR3Q96L12 AC004386.1-201ENST00000393214 761 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 AL360182.1-201ENST00000397433 468 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 MIR450B-201ENST00000401182 78 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.07□□□□□ -1.44
CALR3Q96L12 AC108479.1-201ENST00000431142 427 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 MTND1P17-201ENST00000448961 204 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 AL162388.1-201ENST00000450912 352 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 RPS11P1-201ENST00000451072 473 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.07□□□□□ -1.44
CALR3Q96L12 AP001086.1-201ENST00000494882 321 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.07□□□□□ -1.44
CALR3Q96L12 Y_RNA.689-201ENST00000516589 107 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.07□□□□□ -1.44
CALR3Q96L12 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.07□□□□□ -1.44
CALR3Q96L12 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.07□□□□□ -1.44
CALR3Q96L12 SMILR-201ENST00000533992 553 ntTSL 4 BASIC6.07□□□□□ -1.44
CALR3Q96L12 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.07□□□□□ -1.44
CALR3Q96L12 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.07□□□□□ -1.44
CALR3Q96L12 MIR3941-201ENST00000582572 103 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 AC006116.10-201ENST00000591836 581 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 MIR6774-201ENST00000614651 70 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC6.07□□□□□ -1.44
CALR3Q96L12 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.07□□□□□ -1.44
CALR3Q96L12 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CALR3Q96L12 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CALR3Q96L12 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CALR3Q96L12 AC007938.2-201ENST00000604666 2634 ntBASIC6.07□□□□□ -1.44
CALR3Q96L12 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CALR3Q96L12 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.07□□□□□ -1.44
CALR3Q96L12 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
CALR3Q96L12 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CALR3Q96L12 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CALR3Q96L12 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CALR3Q96L12 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CALR3Q96L12 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CALR3Q96L12 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CALR3Q96L12 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CALR3Q96L12 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
CALR3Q96L12 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CALR3Q96L12 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CALR3Q96L12 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CALR3Q96L12 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.06□□□□□ -1.44
CALR3Q96L12 RNU4-44P-201ENST00000363050 141 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CALR3Q96L12 RNU6-434P-201ENST00000384376 107 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 Y_RNA.482-201ENST00000384377 111 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CALR3Q96L12 SNORA16.2-201ENST00000390991 127 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 RN7SKP146-201ENST00000410242 334 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 EIF4A1P3-201ENST00000411521 244 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 RPL7AP73-201ENST00000413490 353 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 AC245054.2-201ENST00000415639 319 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 SKA2P1-201ENST00000425592 390 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CALR3Q96L12 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC6.06□□□□□ -1.44
CALR3Q96L12 NXT1P1-201ENST00000458481 316 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 RNU7-167P-201ENST00000459160 62 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 AL122020.1-201ENST00000472287 459 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 AP002812.1-201ENST00000495378 474 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 RN7SL101P-201ENST00000496350 279 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 RNU6-677P-201ENST00000516914 101 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 PCNAP4-201ENST00000532690 730 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.06□□□□□ -1.44
CALR3Q96L12 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC6.06□□□□□ -1.44
CALR3Q96L12 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.06□□□□□ -1.44
CALR3Q96L12 AC067852.3-201ENST00000589177 561 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.06□□□□□ -1.44
CALR3Q96L12 AC010680.4-201ENST00000605334 543 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 ATP1B3P1-201ENST00000605365 821 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 AC007619.2-201ENST00000605743 379 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 RNU6ATAC35P-201ENST00000609276 444 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 MIR6809-201ENST00000612189 116 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 SDR42E1P2-201ENST00000614861 481 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 AC090607.5-201ENST00000615692 224 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 AC005899.6-201ENST00000620729 297 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 AL136228.1-201ENST00000622221 319 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 AC135068.12-201ENST00000637370 931 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CALR3Q96L12 AC092747.4-201ENST00000620519 1861 ntBASIC6.06□□□□□ -1.44
CALR3Q96L12 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC6.06□□□□□ -1.44
CALR3Q96L12 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms