Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 KLF3P2-201ENST00000465138 268 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 LARP1BP2-201ENST00000486594 519 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 RNF138P1-201ENST00000502765 546 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 MTND2P33-201ENST00000506452 1031 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 AC099522.1-202ENST00000514718 367 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 COX6CP8-201ENST00000522620 226 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 AC106782.4-201ENST00000568264 210 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 MIR5697-201ENST00000578045 78 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 RBM11P1-201ENST00000604951 799 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 AC005000.2-201ENST00000605468 310 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 AC138749.5-201ENST00000611461 208 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 AC116165.2-201ENST00000616705 206 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 CYP3A51P-201ENST00000633513 256 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 AC099654.12-201ENST00000639868 649 ntBASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SMC1BQ8NDV3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 ERCC6-202ENST00000374127 1782 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 MTND5P1-201ENST00000445440 1375 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 OR11H4-201ENST00000315409 1082 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 Y_RNA.41-201ENST00000362646 102 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 RNU6-533P-201ENST00000384144 107 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 RNU6-809P-201ENST00000384461 107 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AP000580.1-201ENST00000404439 358 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AL590609.2-201ENST00000421430 368 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 RPL36AP10-201ENST00000421785 322 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AC104651.1-201ENST00000427559 735 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 CYCSP32-201ENST00000440548 321 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 RPL7L1P1-201ENST00000448259 785 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AC104073.1-201ENST00000451988 151 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 USP9YP34-201ENST00000453983 808 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 RPL31P50-201ENST00000471002 296 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AC104563.1-201ENST00000476147 376 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 RPL37P25-201ENST00000507308 276 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AC016957.1-201ENST00000534895 309 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AC136619.2-201ENST00000563361 631 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 TPMTP1-201ENST00000592307 737 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 RPL23AP92-201ENST00000603609 255 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AC233280.2-201ENST00000603917 1070 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AC131902.3-201ENST00000611767 581 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AC008250.2-201ENST00000615261 205 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AL160394.1-201ENST00000624765 724 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AC126323.6-202ENST00000568092 3511 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AC114546.3-201ENST00000623582 1734 ntBASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SMC1BQ8NDV3 AC016588.2-201ENST00000632484 3021 ntBASIC5.21□□□□□ -1.57
SMC1BQ8NDV3 LINC00622-201ENST00000562811 1570 ntBASIC5.21□□□□□ -1.57
SMC1BQ8NDV3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SMC1BQ8NDV3 AP001273.1-201ENST00000624493 3152 ntBASIC5.21□□□□□ -1.58
SMC1BQ8NDV3 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SMC1BQ8NDV3 RNY4P24-201ENST00000362735 96 ntBASIC5.21□□□□□ -1.58
SMC1BQ8NDV3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SMC1BQ8NDV3 RNU6-259P-201ENST00000383999 107 ntBASIC5.21□□□□□ -1.58
SMC1BQ8NDV3 RNU5A-6P-201ENST00000384136 116 ntBASIC5.21□□□□□ -1.58
SMC1BQ8NDV3 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.21□□□□□ -1.58
SMC1BQ8NDV3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC5.21□□□□□ -1.58
SMC1BQ8NDV3 MTCO2P5-201ENST00000422621 426 ntBASIC5.21□□□□□ -1.58
SMC1BQ8NDV3 AL513174.1-201ENST00000423182 629 ntBASIC5.21□□□□□ -1.58
SMC1BQ8NDV3 NPM1P34-201ENST00000428821 893 ntBASIC5.21□□□□□ -1.58
SMC1BQ8NDV3 HSPE1P28-201ENST00000443139 211 ntBASIC5.21□□□□□ -1.58
SMC1BQ8NDV3 AC244505.5-201ENST00000443639 207 ntBASIC5.21□□□□□ -1.58
SMC1BQ8NDV3 GDI2P2-201ENST00000445131 608 ntBASIC5.21□□□□□ -1.58
SMC1BQ8NDV3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.21□□□□□ -1.58
SMC1BQ8NDV3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.21□□□□□ -1.58
SMC1BQ8NDV3 AL590365.1-201ENST00000450788 243 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms