Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AP003399.1-201ENST00000637534 361 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AC006504.1-201ENST00000562493 3666 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 OR5BR1P-201ENST00000524992 1330 ntBASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.44□□□□□ -1.7
SYNE3Q6ZMZ3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 AL445523.1-201ENST00000451184 1362 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 SNORA57.1-201ENST00000391227 145 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 HMGN2P8-201ENST00000391458 268 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 ARF4P3-201ENST00000397387 509 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 USP9YP33-201ENST00000412220 421 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 RPL23AP39-201ENST00000415533 405 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 USP9YP35-201ENST00000435696 412 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 ISCA1P2-201ENST00000438679 421 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 SNORA71B-202ENST00000439232 272 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 RPL21P133-201ENST00000443666 476 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 BX276092.4-201ENST00000452056 248 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 AC097493.1-201ENST00000463958 372 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 OR4G11P-201ENST00000492842 939 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 LTV1P1-201ENST00000510683 1237 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 RAC1P2-201ENST00000511164 579 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 NDUFB4P9-201ENST00000511646 388 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 NPM1P41-201ENST00000512920 831 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 RNU6-678P-201ENST00000516832 109 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 AC104986.1-201ENST00000517978 436 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 HSPA8P13-201ENST00000523715 472 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 HSPE1P5-201ENST00000561489 272 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 RN7SL703P-201ENST00000578485 302 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 PIGPP4-201ENST00000584447 307 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 AC006539.2-201ENST00000601729 572 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 AC124312.4-201ENST00000605533 310 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 AC080013.6-201ENST00000606185 215 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 AC122133.1-201ENST00000613964 233 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 AC087359.1-201ENST00000508335 1740 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 AC011477.1-204ENST00000623416 1325 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 ZNF33CP-201ENST00000432492 2030 ntBASIC4.43□□□□□ -1.7
SYNE3Q6ZMZ3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 RPL32P23-201ENST00000397237 405 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 AL591419.1-201ENST00000427423 339 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 ANP32BP2-201ENST00000454525 545 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 AC117522.2-201ENST00000510049 657 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 XKRY-201ENST00000510392 1100 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 TMEM248P1-201ENST00000510579 951 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 AC108043.1-201ENST00000512696 574 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 RNA5SP216-201ENST00000516111 123 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 RNU6-759P-201ENST00000516740 103 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 RN7SKP277-201ENST00000516895 283 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 RNU6-352P-201ENST00000516908 107 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 AL121766.1-201ENST00000547436 487 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 AC006960.3-201ENST00000561845 705 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 AC136618.2-201ENST00000575091 400 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 LARP7P2-201ENST00000575306 125 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 DUXAP11-201ENST00000603858 526 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 AL163642.2-201ENST00000604722 1019 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms